Detailed information NTG1128206

Bioinformatically predicted

Overview

• Name: pilE
• Type: Machinery gene
• Locus tag: E5P2_RS07065
• Genome accession: NZ_LR594666
• Coordinates: 1461219..1461668 (+)
• Length: 149 a.a.
• NCBI ID: WP_162566424.1
• Uniprot ID: A0A8B6LHC2
• Organism: Variovorax sp. SRS16
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1456219..1466668

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
E5P2_RS07055 (G3W92_RS07055)	-	1457119..1457622 (+)	504	WP_162566423.1	pilus assembly protein PilX	-
E5P2_RS07060 (G3W92_RS07060)	-	1457636..1461211 (+)	3576	WP_232080610.1	PilC/PilY family type IV pilus protein	-
E5P2_RS07065 (G3W92_RS07065)	pilE	1461219..1461668 (+)	450	WP_162566424.1	type IV pilin protein	Machinery gene
E5P2_RS07070 (G3W92_RS07070)	-	1461679..1462299 (-)	621	WP_162566425.1	UbiX family flavin prenyltransferase	-
E5P2_RS07075 (G3W92_RS07075)	-	1462317..1463378 (-)	1062	WP_162566426.1	GTP-binding protein	-
E5P2_RS07080 (G3W92_RS07080)	-	1463393..1465687 (-)	2295	WP_162566427.1	xanthine dehydrogenase family protein molybdopterin-binding subunit	-
E5P2_RS07085 (G3W92_RS07085)	-	1465684..1466166 (-)	483	WP_162566428.1	(2Fe-2S)-binding protein	-

Sequence

Protein

• Length: 149 a.a.
• Molecular weight: 16066.13 Da
• Isoelectric Point: 6.8699

>NTDB_id=1128206 E5P2_RS07065 WP_162566424.1 1461219..1461668(+) (pilE) [Variovorax sp. SRS16]
MNDSFAFSNTCKRRTAISGFTLLELMITLAIVALLTVIAMPSYRSYVLRSHRSDAYAALTQDQAILERCYAQNYSYSQTC
AALPVFPQTSAQNFYTVVLTQSATSYLLTATPSGSQLADTACASLSIDQTNSKTALDSQGVASASCWGQ

Nucleotide

• Length: 450 bp

>NTDB_id=1128206 E5P2_RS07065 WP_162566424.1 1461219..1461668(+) (pilE) [Variovorax sp. SRS16]
ATGAACGATTCATTTGCTTTCTCGAACACGTGCAAACGCCGAACGGCCATCTCCGGCTTCACGTTGCTGGAACTGATGAT
CACGCTCGCCATCGTGGCGCTGCTGACCGTCATCGCAATGCCTTCCTATCGCAGCTATGTATTGCGATCGCACCGCTCCG
ATGCCTACGCGGCCCTGACGCAGGATCAGGCGATTCTCGAACGTTGCTATGCGCAGAACTATTCGTACAGCCAGACATGC
GCCGCTTTGCCGGTCTTTCCGCAGACATCAGCGCAGAACTTCTACACCGTGGTGCTGACGCAAAGCGCGACCTCATACCT
GCTTACCGCGACCCCGTCGGGATCTCAACTGGCCGATACCGCGTGCGCATCCCTCTCCATCGACCAGACGAACAGCAAGA
CGGCGCTCGACAGTCAAGGCGTGGCCAGCGCTTCGTGCTGGGGACAATGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (41-126)

• Prokaryotic N-terminal methylation motif (N_methyl) (18-40)

3D structure

• AlphaFold DB: A0A8B6LHC2

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilE	Legionella pneumophila str. Paris	52.941	91.275	0.483
pilE	Legionella pneumophila strain ERS1305867	52.941	91.275	0.483