Detailed information NTG1128062

Bioinformatically predicted

Overview

• Name: oppD
• Type: Regulator
• Locus tag: FGL20_RS08640
• Genome accession: NZ_LR594050
• Coordinates: 1739728..1740774 (-)
• Length: 348 a.a.
• NCBI ID: WP_003083752.1
• Uniprot ID: A0A7W0AS78
• Organism: Streptococcus porcinus strain NCTC10925
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1734728..1745774

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL20_RS08615 (NCTC10925_01735)	rimI	1735425..1735853 (-)	429	WP_003083288.1	ribosomal protein S18-alanine N-acetyltransferase	-
FGL20_RS08620 (NCTC10925_01736)	tsaB	1735853..1736545 (-)	693	WP_003083824.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB	-
FGL20_RS08625 (NCTC10925_01737)	-	1736824..1737054 (+)	231	WP_003085221.1	DNA-dependent RNA polymerase subunit epsilon	-
FGL20_RS08630 (NCTC10925_01738)	rnjA	1737056..1738741 (+)	1686	WP_093958999.1	ribonuclease J1	-
FGL20_RS08635 (NCTC10925_01739)	amiF	1738793..1739728 (-)	936	WP_093959000.1	ABC transporter ATP-binding protein	Regulator
FGL20_RS08640 (NCTC10925_01740)	oppD	1739728..1740774 (-)	1047	WP_003083752.1	ABC transporter ATP-binding protein	Regulator
FGL20_RS08645 (NCTC10925_01741)	-	1740785..1741816 (-)	1032	WP_003085327.1	ABC transporter permease	-
FGL20_RS08650 (NCTC10925_01742)	-	1741826..1742740 (-)	915	WP_003083822.1	ABC transporter permease	-
FGL20_RS08655 (NCTC10925_01743)	-	1742812..1744470 (-)	1659	WP_003083189.1	peptide ABC transporter substrate-binding protein	-

Sequence

Protein

• Length: 348 a.a.
• Molecular weight: 38469.12 Da
• Isoelectric Point: 5.8513

>NTDB_id=1128062 FGL20_RS08640 WP_003083752.1 1739728..1740774(-) (oppD) [Streptococcus porcinus strain NCTC10925]
MSNETILNVKNLHVDFKTYAGDVKAIRDINFELYKGETLAIVGESGSGKSVTTRTLMGLNAKNASISGDIDFKGKKLNNL
KEEEWVKVRGKEIAMIFQDPMTSLDPTMKIGKQIAEAILIHESVSKKEALDRALKLMHQVGIPNAEEHINDYPHQWSGGM
RQRAVIAIALAANPEILIADEPTTALDVTIQNQILKLMKGLQSQISSSIIFITHDLGVVAGMADRVAVMYAGKIVEYGTV
DEVFYNPQHPYTWGLLKSMPTTDTEAGTLESIPGTPPDLLNPPKGDAFAARNEFALDIDHEEEPPMFKVSDTHFAATWLL
DERAPKVIPPVQIQKRWKKWAEKNGGQA

Nucleotide

• Length: 1047 bp

>NTDB_id=1128062 FGL20_RS08640 WP_003083752.1 1739728..1740774(-) (oppD) [Streptococcus porcinus strain NCTC10925]
ATGTCAAATGAAACAATCTTAAATGTTAAAAACCTCCACGTTGATTTCAAAACTTATGCTGGAGATGTTAAAGCTATCCG
AGATATCAATTTCGAATTGTATAAGGGTGAGACCTTGGCAATCGTCGGTGAATCTGGATCAGGAAAGTCAGTGACTACCC
GGACCTTAATGGGGTTGAATGCAAAAAATGCAAGTATTTCAGGTGATATTGACTTTAAAGGAAAAAAACTCAATAACTTA
AAAGAGGAAGAATGGGTTAAAGTTCGTGGAAAAGAAATTGCCATGATTTTCCAAGATCCAATGACTAGTTTGGATCCTAC
CATGAAAATTGGTAAGCAAATTGCTGAAGCGATTCTAATCCATGAGTCAGTATCTAAGAAAGAAGCCTTAGATCGTGCTT
TGAAATTGATGCATCAAGTAGGTATTCCTAATGCTGAAGAGCACATCAATGACTATCCTCACCAGTGGTCGGGTGGTATG
CGACAACGGGCCGTTATTGCTATCGCCTTAGCAGCTAATCCGGAGATATTGATTGCTGATGAACCAACAACTGCCCTTGA
TGTTACTATTCAAAATCAAATTTTGAAATTAATGAAAGGCTTGCAGTCGCAAATTTCATCATCTATTATCTTTATTACTC
ATGACTTAGGAGTTGTTGCAGGTATGGCGGATCGTGTTGCGGTTATGTATGCTGGAAAAATTGTTGAATATGGTACAGTT
GATGAAGTCTTCTACAATCCACAGCATCCCTATACTTGGGGCCTCTTAAAATCAATGCCGACAACAGATACAGAAGCTGG
TACTTTAGAATCAATTCCAGGTACACCACCGGACTTACTAAATCCACCAAAAGGTGATGCTTTTGCAGCTCGTAACGAAT
TTGCTTTAGACATTGACCATGAAGAAGAACCTCCAATGTTTAAAGTTAGTGACACGCATTTTGCTGCTACTTGGCTGTTA
GATGAGCGTGCACCAAAAGTTATTCCTCCAGTTCAAATACAAAAACGTTGGAAGAAATGGGCTGAAAAGAACGGAGGTCA
AGCTTAA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (235-297)

• ABC transporter (ABC_tran) (27-183)

3D structure

• AlphaFold DB: A0A7W0AS78

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
oppD	Streptococcus mutans UA159	78.841	99.138	0.782
amiE	Streptococcus salivarius strain HSISS4	56.083	96.839	0.543
amiE	Streptococcus thermophilus LMG 18311	55.786	96.839	0.54
amiE	Streptococcus thermophilus LMD-9	55.786	96.839	0.54