Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   M036_RS06065 Genome accession   NZ_CP005997
Coordinates   1168483..1169604 (+) Length   373 a.a.
NCBI ID   WP_010886479.1    Uniprot ID   O31604
Organism   Bacillus subtilis TO-A     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1163483..1174604
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  M036_RS06040 (M036_05990) yjbB 1164125..1165342 (+) 1218 WP_010886478.1 MFS transporter -
  M036_RS06045 (M036_05995) yjbC 1165506..1166084 (+) 579 WP_003244921.1 GNAT family N-acetyltransferase -
  M036_RS06050 (M036_06000) spx 1166265..1166660 (+) 396 WP_014476435.1 transcriptional regulator Spx -
  M036_RS06055 (M036_06005) yjbE 1166703..1167359 (-) 657 WP_003232944.1 TerC family protein -
  M036_RS21595 - 1167529..1167669 (+) 141 WP_119122854.1 hypothetical protein -
  M036_RS06060 (M036_06010) mecA 1167636..1168292 (+) 657 WP_003245194.1 adaptor protein MecA Regulator
  M036_RS21600 - 1168287..1168409 (-) 123 WP_003245684.1 hypothetical protein -
  M036_RS06065 (M036_06015) coiA 1168483..1169604 (+) 1122 WP_010886479.1 competence protein CoiA Machinery gene
  M036_RS06070 (M036_06020) pepF 1169834..1171663 (+) 1830 WP_003245178.1 oligoendopeptidase F -
  M036_RS06075 (M036_06025) - 1171701..1171868 (-) 168 WP_003244944.1 hypothetical protein -
  M036_RS06085 (M036_06035) spxH 1172182..1173081 (-) 900 WP_003245184.1 protease adaptor protein SpxH -
  M036_RS06090 (M036_06040) bhbI 1173078..1173476 (-) 399 WP_003232928.1 group 2 truncated hemoglobin YjbI -
  M036_RS06095 (M036_06045) cwlQ 1173731..1174465 (-) 735 WP_003245645.1 bifunctional muramidase/murein lytic transglycosylase -

Sequence


Protein


Download         Length: 373 a.a.        Molecular weight: 43689.70 Da        Isoelectric Point: 10.1187

>NTDB_id=112806 M036_RS06065 WP_010886479.1 1168483..1169604(+) (coiA) [Bacillus subtilis TO-A]
MFHLLGAQQNQKLKRRRFFCPVCGGELAVKLGLQKAPHFAHKQNKSCAIDIEPESAYHLEGKRQLYVWLKTQRASPILEP
YIRTINQRPDVMARIKEHMLAVEYQCATIAPDVFQKRTEGFKQEGIIPQWIMGYSRLKRTASSFYQLSTFHWQFINASPY
RELICYCPERRSFLRLSHIIPFYTNHSYSSVQTIPIHRAGAGDLFFTEPKPSIQYSGWTKAIHRFRHKPHRFNSKETNRL
RLLFYEKRQTPFSFLPTEVFVPVRKGAVFKSPVFVWQGFLYLFMTDLGGKRAPIRFSAVLQQCKLHIHNKNIALRSECSE
ECLSEAVKQYIDFLCKKGFLRETQKEVYVLNQPAGGIHSMQDLIERDRSCFIE

Nucleotide


Download         Length: 1122 bp        

>NTDB_id=112806 M036_RS06065 WP_010886479.1 1168483..1169604(+) (coiA) [Bacillus subtilis TO-A]
ATGTTTCACCTTCTAGGCGCTCAGCAAAACCAGAAATTAAAGCGGAGACGGTTCTTCTGTCCGGTATGCGGGGGAGAGCT
AGCTGTGAAGCTCGGACTTCAAAAAGCGCCGCATTTTGCCCATAAACAGAACAAGTCCTGCGCCATAGACATCGAGCCGG
AAAGCGCCTACCACTTAGAAGGAAAAAGACAGCTGTATGTATGGCTGAAAACGCAACGGGCTTCACCAATATTGGAGCCG
TATATAAGGACAATCAACCAAAGACCGGACGTCATGGCAAGAATCAAGGAGCATATGCTTGCTGTTGAATATCAATGCGC
CACTATCGCTCCAGATGTCTTTCAAAAGCGGACAGAGGGCTTCAAACAAGAAGGAATCATCCCGCAGTGGATTATGGGAT
ACAGCCGCTTAAAACGGACTGCTTCGTCCTTTTATCAGCTTTCAACTTTTCATTGGCAGTTTATCAATGCAAGTCCATAC
AGAGAACTGATATGTTATTGTCCTGAAAGGCGTTCTTTTCTCCGGCTCAGCCACATCATTCCATTCTACACAAACCATTC
TTATTCCTCAGTCCAAACGATCCCTATCCATCGGGCAGGTGCAGGCGATCTTTTTTTCACTGAACCGAAACCCTCAATTC
AATATTCAGGCTGGACGAAAGCGATTCACCGTTTTCGCCATAAACCCCATCGGTTTAACTCAAAGGAAACAAATCGCCTT
AGGCTGCTGTTTTATGAGAAACGACAGACGCCTTTTTCTTTTCTGCCGACTGAAGTGTTTGTTCCTGTTAGAAAAGGGGC
AGTTTTTAAGAGTCCGGTTTTTGTGTGGCAGGGGTTTCTTTATTTGTTTATGACGGATCTTGGAGGTAAACGTGCGCCAA
TTCGTTTTTCAGCCGTTTTGCAGCAGTGCAAACTGCACATTCATAATAAGAACATTGCACTCAGGTCCGAATGCAGCGAA
GAGTGTCTTTCAGAAGCGGTTAAACAGTATATTGATTTTTTGTGCAAGAAGGGATTTTTAAGGGAGACTCAGAAAGAAGT
ATATGTGCTGAATCAGCCTGCAGGAGGCATACACTCCATGCAGGATCTCATAGAAAGAGACCGCAGCTGTTTTATAGAAT
GA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

100

100

1


Multiple sequence alignment