Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FGL20_RS06495 Genome accession   NZ_LR594050
Coordinates   1322649..1323461 (-) Length   270 a.a.
NCBI ID   WP_003084363.1    Uniprot ID   A0A4V0H7Z6
Organism   Streptococcus porcinus strain NCTC10925     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1317649..1328461
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL20_RS06485 (NCTC10925_01306) smc 1318306..1321851 (-) 3546 WP_093959101.1 chromosome segregation protein SMC -
  FGL20_RS06490 (NCTC10925_01307) rnc 1321852..1322544 (-) 693 WP_003085736.1 ribonuclease III -
  FGL20_RS06495 (NCTC10925_01308) vicX 1322649..1323461 (-) 813 WP_003084363.1 MBL fold metallo-hydrolase Regulator
  FGL20_RS06500 (NCTC10925_01309) vicK 1323462..1324820 (-) 1359 WP_003082933.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FGL20_RS06505 (NCTC10925_01310) vicR 1324813..1325523 (-) 711 WP_003084933.1 response regulator YycF Regulator
  FGL20_RS06510 (NCTC10925_01311) - 1325784..1326563 (+) 780 WP_003083323.1 amino acid ABC transporter ATP-binding protein -
  FGL20_RS06515 (NCTC10925_01312) - 1326576..1327394 (+) 819 WP_003083506.1 transporter substrate-binding domain-containing protein -
  FGL20_RS06520 (NCTC10925_01313) - 1327412..1328116 (+) 705 WP_003085779.1 amino acid ABC transporter permease -

Sequence

Protein


Download         Length: 270 a.a.        Molecular weight: 30374.41 Da        Isoelectric Point: 5.5848

>NTDB_id=1128046 FGL20_RS06495 WP_003084363.1 1322649..1323461(-) (vicX) [Streptococcus porcinus strain NCTC10925]
MLEQEGFKYSILASGSTGNSFYLETPKKRILVDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVLARKYHL
DIYANQKTWQIIDDRNMIGKIDSNQKYIFDRDKVMTFGDLDIESFGVSHDAADPQFYRFMKDNKSFVMLTDTGYVSDRMS
GIIDNADAYLIESNHDIEILRSGSYPWSLKQRILSDKGHLSNEDGAGAMIRSIGYKTKKIFLGHLSKENNIKELAHMTME
NQLAMADLAVGTDFKVYDTSPDSACSLTDI

Nucleotide


Download         Length: 813 bp        

>NTDB_id=1128046 FGL20_RS06495 WP_003084363.1 1322649..1323461(-) (vicX) [Streptococcus porcinus strain NCTC10925]
ATGCTAGAACAAGAAGGATTTAAATATAGTATTTTAGCATCGGGTTCTACGGGTAATAGTTTCTATTTAGAAACCCCTAA
AAAACGGATTCTTGTTGATGCAGGTTTGACTGGTAAAAAAATTACCAGTCTCTTAGCAGAAATAGATCGGAAGCCAGAAG
ATTTAGATGCTATATTAATTACACATGAACATTCTGATCATATAAAAGGAGTCGGTGTCCTTGCTCGTAAGTATCATCTT
GATATTTATGCTAACCAAAAAACGTGGCAGATTATTGATGATAGAAATATGATTGGAAAAATTGATTCGAATCAAAAATA
TATTTTTGACCGTGATAAGGTCATGACGTTTGGAGATCTTGATATTGAAAGTTTTGGTGTTAGTCACGATGCGGCAGATC
CCCAATTTTACCGTTTTATGAAAGATAATAAATCATTTGTTATGTTAACAGATACTGGTTATGTGAGTGATCGTATGTCT
GGCATTATTGATAATGCAGATGCTTATTTGATTGAATCAAATCATGATATTGAGATTTTAAGATCAGGCTCTTATCCATG
GAGTTTAAAACAGCGGATTTTATCTGATAAGGGCCACTTGTCAAATGAAGATGGTGCTGGAGCTATGATTCGCAGCATAG
GTTATAAGACTAAGAAAATTTTCCTTGGGCACCTGAGTAAGGAAAATAACATAAAAGAATTAGCTCACATGACAATGGAA
AATCAATTAGCGATGGCGGATTTAGCAGTAGGAACTGACTTTAAAGTATATGATACATCGCCAGATAGTGCTTGCTCCTT
AACAGATATTTAG

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(16-224)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A4V0H7Z6

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

75.465

99.63

0.752

Multiple sequence alignment