Detailed information
Bioinformatically predicted
Overview
| Name | clpX | Type | Regulator |
| Locus tag | FGL20_RS05265 | Genome accession | NZ_LR594050 |
| Coordinates | 1066530..1067759 (-) | Length | 409 a.a. |
| NCBI ID | WP_003086008.1 | Uniprot ID | A0A4V0H838 |
| Organism | Streptococcus porcinus strain NCTC10925 | ||
| Function | require for competence development (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1061530..1072759
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL20_RS05245 (NCTC10925_01048) | rplJ | 1061865..1062365 (-) | 501 | WP_003083012.1 | 50S ribosomal protein L10 | - |
| FGL20_RS05250 (NCTC10925_01050) | - | 1062775..1064874 (+) | 2100 | WP_093958733.1 | AAA family ATPase | - |
| FGL20_RS05255 (NCTC10925_01051) | - | 1065101..1065817 (-) | 717 | WP_093958732.1 | hypothetical protein | - |
| FGL20_RS05260 (NCTC10925_01052) | yihA | 1065918..1066517 (-) | 600 | WP_093958731.1 | ribosome biogenesis GTP-binding protein YihA/YsxC | - |
| FGL20_RS05265 (NCTC10925_01053) | clpX | 1066530..1067759 (-) | 1230 | WP_003086008.1 | ATP-dependent Clp protease ATP-binding subunit ClpX | Regulator |
| FGL20_RS05270 (NCTC10925_01054) | - | 1067791..1067961 (-) | 171 | WP_003083300.1 | hypothetical protein | - |
| FGL20_RS05275 (NCTC10925_01055) | - | 1067985..1068482 (-) | 498 | WP_093958730.1 | dihydrofolate reductase | - |
| FGL20_RS05280 (NCTC10925_01056) | - | 1068561..1069400 (-) | 840 | WP_093958729.1 | thymidylate synthase | - |
| FGL20_RS05285 (NCTC10925_01057) | - | 1069600..1070772 (+) | 1173 | WP_093958728.1 | hydroxymethylglutaryl-CoA synthase | - |
| FGL20_RS05290 (NCTC10925_01058) | - | 1070762..1072039 (+) | 1278 | WP_093958959.1 | hydroxymethylglutaryl-CoA reductase, degradative | - |
Sequence
Protein
Download Length: 409 a.a. Molecular weight: 44970.41 Da Isoelectric Point: 4.4921
>NTDB_id=1128041 FGL20_RS05265 WP_003086008.1 1066530..1067759(-) (clpX) [Streptococcus porcinus strain NCTC10925]
MAGNRSTDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLETLNQYVVGQDR
AKRALSVAVYNHYKRVSFAESRDDEEVELQKSNILMIGPTGSGKTFLAQTLAKTLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDEDASYMQEIISEDIQTFGLIPEFIGRLPVVAALEQLSTSDLVKI
LTEPKNALVKQYQTLLSYDGVELTFDQEALDAIAEKAIARKTGARGLRSIIEETMLDLMFEIPSQEDVTKVRITKDAVDG
TAKPILEIA
MAGNRSTDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLETLNQYVVGQDR
AKRALSVAVYNHYKRVSFAESRDDEEVELQKSNILMIGPTGSGKTFLAQTLAKTLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDEDASYMQEIISEDIQTFGLIPEFIGRLPVVAALEQLSTSDLVKI
LTEPKNALVKQYQTLLSYDGVELTFDQEALDAIAEKAIARKTGARGLRSIIEETMLDLMFEIPSQEDVTKVRITKDAVDG
TAKPILEIA
Nucleotide
Download Length: 1230 bp
>NTDB_id=1128041 FGL20_RS05265 WP_003086008.1 1066530..1067759(-) (clpX) [Streptococcus porcinus strain NCTC10925]
ATGGCGGGAAATCGAAGTACTGATATCAAGGTTCATTGTTCATTTTGTGGCAAGAGCCAAGATGAAGTCAAAAAAATTAT
AGCAGGTAACAATGTCTTTATATGTAATGAATGTGTTGCCCTGTCACAAGAAATTATTAAAGAAGAATTAGCTGAGGAAG
TATTAGCTGATCTGACAGAAGTTCCTAAACCAAAAGAATTATTAGAGACACTAAACCAATATGTGGTTGGTCAAGATCGT
GCAAAAAGAGCTTTGTCGGTAGCTGTTTATAACCATTACAAACGGGTTTCTTTTGCAGAAAGTCGTGATGATGAAGAAGT
GGAACTACAAAAATCAAATATTTTAATGATTGGTCCAACCGGTTCTGGGAAAACATTCCTAGCTCAAACATTAGCTAAGA
CCTTAAATGTTCCTTTTGCAATTGCAGATGCTACCTCCTTGACTGAGGCTGGTTACGTAGGTGAGGATGTTGAAAACATT
TTATTGAAACTGATTCAGGCAGCAGACTATAATGTTGAGCGCGCTGAACGTGGTATCATCTATGTTGATGAGATTGATAA
AATTGCTAAAAAAGGTGAAAACGTGTCAATTACCCGTGATGTATCAGGAGAAGGAGTTCAGCAAGCCCTCTTGAAAATTA
TTGAAGGAACTGTTGCTTCTGTTCCTCCGCAAGGTGGCCGTAAACACCCTAACCAAGAAATGATACAGATTGACACTAAA
AATATTTTATTTATCGTTGGCGGTGCTTTTGATGGTATTGAAGAGATTGTTAAACAAAGATTGGGAGAAAAAATTATTGG
TTTTGGACAAAACAGTCGCAAAATTGATGAAGATGCCTCCTATATGCAAGAAATTATTTCTGAGGATATCCAAACCTTTG
GTTTAATTCCGGAGTTCATTGGAAGATTACCAGTTGTTGCAGCCTTAGAACAGCTTAGCACCAGTGATTTAGTAAAAATA
CTGACCGAGCCAAAAAATGCTCTTGTCAAACAATATCAAACCTTACTATCTTACGATGGTGTGGAACTGACTTTTGATCA
AGAAGCTTTAGATGCAATTGCTGAAAAAGCGATTGCTCGTAAAACTGGTGCTCGTGGATTACGCTCAATCATTGAAGAGA
CAATGTTAGATCTTATGTTTGAAATCCCTAGCCAAGAAGATGTGACCAAAGTACGTATTACAAAAGATGCTGTTGATGGG
ACTGCAAAACCAATCTTGGAAATAGCTTAA
ATGGCGGGAAATCGAAGTACTGATATCAAGGTTCATTGTTCATTTTGTGGCAAGAGCCAAGATGAAGTCAAAAAAATTAT
AGCAGGTAACAATGTCTTTATATGTAATGAATGTGTTGCCCTGTCACAAGAAATTATTAAAGAAGAATTAGCTGAGGAAG
TATTAGCTGATCTGACAGAAGTTCCTAAACCAAAAGAATTATTAGAGACACTAAACCAATATGTGGTTGGTCAAGATCGT
GCAAAAAGAGCTTTGTCGGTAGCTGTTTATAACCATTACAAACGGGTTTCTTTTGCAGAAAGTCGTGATGATGAAGAAGT
GGAACTACAAAAATCAAATATTTTAATGATTGGTCCAACCGGTTCTGGGAAAACATTCCTAGCTCAAACATTAGCTAAGA
CCTTAAATGTTCCTTTTGCAATTGCAGATGCTACCTCCTTGACTGAGGCTGGTTACGTAGGTGAGGATGTTGAAAACATT
TTATTGAAACTGATTCAGGCAGCAGACTATAATGTTGAGCGCGCTGAACGTGGTATCATCTATGTTGATGAGATTGATAA
AATTGCTAAAAAAGGTGAAAACGTGTCAATTACCCGTGATGTATCAGGAGAAGGAGTTCAGCAAGCCCTCTTGAAAATTA
TTGAAGGAACTGTTGCTTCTGTTCCTCCGCAAGGTGGCCGTAAACACCCTAACCAAGAAATGATACAGATTGACACTAAA
AATATTTTATTTATCGTTGGCGGTGCTTTTGATGGTATTGAAGAGATTGTTAAACAAAGATTGGGAGAAAAAATTATTGG
TTTTGGACAAAACAGTCGCAAAATTGATGAAGATGCCTCCTATATGCAAGAAATTATTTCTGAGGATATCCAAACCTTTG
GTTTAATTCCGGAGTTCATTGGAAGATTACCAGTTGTTGCAGCCTTAGAACAGCTTAGCACCAGTGATTTAGTAAAAATA
CTGACCGAGCCAAAAAATGCTCTTGTCAAACAATATCAAACCTTACTATCTTACGATGGTGTGGAACTGACTTTTGATCA
AGAAGCTTTAGATGCAATTGCTGAAAAAGCGATTGCTCGTAAAACTGGTGCTCGTGGATTACGCTCAATCATTGAAGAGA
CAATGTTAGATCTTATGTTTGAAATCCCTAGCCAAGAAGATGTGACCAAAGTACGTATTACAAAAGATGCTGTTGATGGG
ACTGCAAAACCAATCTTGGAAATAGCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpX | Streptococcus mutans UA159 |
89.242 |
100 |
0.892 |
| clpX | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
59.102 |
98.044 |
0.579 |