Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FGL23_RS03815 Genome accession   NZ_LR594049
Coordinates   798351..799154 (+) Length   267 a.a.
NCBI ID   WP_045634630.1    Uniprot ID   A0AB34SA49
Organism   Streptococcus gordonii strain NCTC10231     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 793351..804154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL23_RS03795 (NCTC10231_00758) - 793513..794139 (+) 627 WP_081106375.1 AAA family ATPase -
  FGL23_RS03800 (NCTC10231_00759) thrS 794150..796093 (+) 1944 WP_061603699.1 threonine--tRNA ligase -
  FGL23_RS03805 (NCTC10231_00760) micA 796303..797004 (+) 702 WP_008809004.1 response regulator YycF Regulator
  FGL23_RS03810 (NCTC10231_00761) micB 796997..798358 (+) 1362 WP_060970310.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FGL23_RS03815 (NCTC10231_00762) vicX 798351..799154 (+) 804 WP_045634630.1 MBL fold metallo-hydrolase Regulator
  FGL23_RS03820 (NCTC10231_00763) - 799189..799545 (+) 357 WP_045773784.1 YbaN family protein -
  FGL23_RS03825 (NCTC10231_00764) rnc 799788..800486 (+) 699 WP_061603700.1 ribonuclease III -
  FGL23_RS03830 (NCTC10231_00765) smc 800477..804010 (+) 3534 WP_061603701.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29688.67 Da        Isoelectric Point: 6.1195

>NTDB_id=1127965 FGL23_RS03815 WP_045634630.1 798351..799154(+) (vicX) [Streptococcus gordonii strain NCTC10231]
MTKEGFKYSILASGSSGNCFYLETAKKKILVDAGLSGKKITSLLSEINRKPEDLDAILVTHEHKDHIHGVGVLARKYNLD
IYANEDTWKAMDSALGKIDISQKHIFEMGKVMTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAGVV
ENADGYLIESNHDVEILRSGAYPWSLKQRILSDKGHLSNEDGADTMIRTLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLAVNHDFQVLDTSPDTATPLTSI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=1127965 FGL23_RS03815 WP_045634630.1 798351..799154(+) (vicX) [Streptococcus gordonii strain NCTC10231]
ATGACTAAGGAAGGTTTTAAGTATAGCATTTTAGCATCTGGATCCAGTGGTAATTGTTTTTATTTAGAAACAGCCAAAAA
GAAGATTTTAGTGGATGCAGGACTATCTGGTAAAAAAATCACTAGTCTTCTAAGTGAAATTAATCGTAAACCAGAAGATT
TAGATGCTATTTTAGTAACTCATGAACATAAGGATCACATTCATGGTGTTGGGGTCTTAGCCCGCAAGTATAACTTAGAT
ATCTATGCTAACGAAGATACTTGGAAAGCTATGGATAGTGCCTTGGGAAAAATTGATATTAGCCAAAAGCATATTTTTGA
AATGGGTAAGGTTATGACTTTTGGTGATATAGATATTGAAAGTTTTGGTGTTAGCCATGATGCGGCGGCACCACAATTTT
ATCGGTTTATGAAAGACGATAAAAGCTTTGTCATGCTGACGGATACGGGCTATGTGAGTGACCGTATGGCTGGAGTGGTT
GAAAATGCAGATGGTTACTTGATTGAGAGTAATCATGATGTAGAAATTTTGCGTAGTGGGGCTTACCCTTGGAGTCTCAA
ACAGCGTATTTTATCCGATAAAGGTCACTTATCTAATGAAGATGGTGCTGATACGATGATTCGAACCTTGGGGAACCGTA
CCAAAAAGATTTATCTAGGTCACTTGAGTAAGGAGAATAATATCAAGGAGCTGGCTCATATGACTATGGTTAATCAGCTG
GCTCAAGCTGACTTGGCAGTCAATCATGATTTTCAAGTTTTGGATACTTCGCCTGATACGGCTACGCCTCTGACATCAAT
TTAG

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-213)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

80.15

100

0.802

Multiple sequence alignment