Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   LX00_RS01270 Genome accession   NZ_CP009534
Coordinates   270081..270716 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain Strain AbH12O-A2     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 265081..275716
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LX00_RS01255 (LX00_01260) - 265870..267054 (+) 1185 WP_000939105.1 S41 family peptidase -
  LX00_RS01260 (LX00_01265) - 267058..268478 (-) 1421 Protein_243 sigma-54-dependent transcriptional regulator -
  LX00_RS01265 (LX00_01270) pilS 268502..270070 (-) 1569 WP_001160330.1 PAS domain-containing sensor histidine kinase Regulator
  LX00_RS01270 (LX00_01275) letA 270081..270716 (-) 636 WP_000633799.1 response regulator Regulator
  LX00_RS01275 (LX00_01280) pbpG 270929..271975 (+) 1047 WP_031946417.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  LX00_RS01280 (LX00_01285) thrC 272083..273222 (-) 1140 WP_000063593.1 threonine synthase -
  LX00_RS01285 (LX00_01290) - 273278..274579 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  LX00_RS01290 (LX00_01295) - 274824..275639 (-) 816 WP_000011163.1 DsbC family protein -

Sequence

Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=112790 LX00_RS01270 WP_000633799.1 270081..270716(-) (letA) [Acinetobacter baumannii strain Strain AbH12O-A2]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=112790 LX00_RS01270 WP_000633799.1 270081..270716(-) (letA) [Acinetobacter baumannii strain Strain AbH12O-A2]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCGGGCATCGGTGGCGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAGCCATAA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(4-116)

Bacterial regulatory proteins, luxR family (GerE)

(147-203)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55
  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55

Multiple sequence alignment