Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   FGL18_RS10650 Genome accession   NZ_LR594046
Coordinates   2199491..2200264 (+) Length   257 a.a.
NCBI ID   WP_138126919.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae strain NCTC6403     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2194491..2205264
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL18_RS10635 (NCTC6403_02182) - 2195946..2197466 (+) 1521 WP_138126913.1 IS1182 family transposase -
  FGL18_RS10640 (NCTC6403_02183) rlmH 2197467..2197946 (-) 480 WP_138126915.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FGL18_RS10645 (NCTC6403_02184) htrA 2198156..2199376 (+) 1221 WP_138126917.1 trypsin-like peptidase domain-containing protein Regulator
  FGL18_RS10650 (NCTC6403_02185) spo0J 2199491..2200264 (+) 774 WP_138126919.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 257 a.a.        Molecular weight: 28926.61 Da        Isoelectric Point: 9.9097

>NTDB_id=1127827 FGL18_RS10650 WP_138126919.1 2199491..2200264(+) (spo0J) [Streptococcus dysgalactiae strain NCTC6403]
MTELLKSIPIEDIVANPYQPRLQFNQKELEDLANSIKANGLIQPIIVRKSDIFGYELVAGERRFKASKMAGLTKVPAIVK
NMSSLESMQQAIVENLQRADLNPIEEAKAYQLLIEKNQMTHEEVAKYMGKSRPYISNTLRLLQLPQTISKAVEEGDISAG
HARALLTLTDEKEQLVYANRIKNEGLSVRQIEHMVTPKLKTTPTQKNKNIFITSLENQLAQSLGLPAKIKLKSTQSGQLL
LPFANQEELNRIINKLL

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1127827 FGL18_RS10650 WP_138126919.1 2199491..2200264(+) (spo0J) [Streptococcus dysgalactiae strain NCTC6403]
ATGACTGAACTATTGAAATCTATTCCAATTGAAGATATTGTAGCCAATCCCTATCAACCAAGGCTGCAGTTTAATCAAAA
GGAACTAGAAGATTTGGCTAATTCAATCAAGGCAAATGGACTTATTCAACCTATTATTGTTCGAAAATCTGACATCTTTG
GTTATGAATTAGTTGCAGGAGAACGACGCTTTAAGGCTTCTAAAATGGCTGGGCTAACAAAGGTACCTGCTATTGTCAAA
AACATGTCCTCTCTGGAAAGTATGCAACAAGCTATCGTAGAAAATTTACAACGGGCTGATTTAAATCCCATTGAAGAAGC
AAAAGCTTATCAGCTACTGATTGAAAAAAATCAAATGACACATGAAGAGGTTGCCAAATATATGGGAAAATCAAGACCTT
ATATTAGCAATACTTTACGCCTACTGCAACTTCCGCAAACAATTAGTAAAGCAGTAGAAGAAGGAGACATTAGTGCAGGA
CACGCGCGTGCTCTTCTCACACTAACAGACGAAAAGGAACAGTTAGTTTACGCTAATAGAATCAAAAATGAAGGGTTAAG
TGTGCGACAAATTGAGCATATGGTAACTCCAAAACTCAAAACCACACCTACCCAGAAAAATAAAAATATTTTTATCACTT
CTTTAGAAAATCAGCTGGCCCAATCTCTAGGGTTACCAGCCAAAATCAAATTGAAATCAACTCAGAGTGGTCAATTGCTG
TTACCATTTGCTAATCAAGAGGAATTAAACAGAATTATCAACAAGTTGCTTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.812

99.611

0.576


Multiple sequence alignment