Detailed information
Bioinformatically predicted
Overview
| Name | comYH | Type | Machinery gene |
| Locus tag | FGL18_RS00755 | Genome accession | NZ_LR594046 |
| Coordinates | 121291..122244 (+) | Length | 317 a.a. |
| NCBI ID | WP_138124423.1 | Uniprot ID | - |
| Organism | Streptococcus dysgalactiae strain NCTC6403 | ||
| Function | dsDNA binding to the cell surface; assembly of the pseudopilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 116291..127244
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGL18_RS00715 (NCTC6403_00145) | - | 117069..117434 (+) | 366 | WP_003055257.1 | DUF1033 family protein | - |
| FGL18_RS00720 (NCTC6403_00146) | comYA | 117563..118504 (+) | 942 | WP_138124405.1 | competence type IV pilus ATPase ComGA | Machinery gene |
| FGL18_RS00725 (NCTC6403_00147) | comYB | 118440..119471 (+) | 1032 | WP_138126921.1 | competence type IV pilus assembly protein ComGB | Machinery gene |
| FGL18_RS00730 (NCTC6403_00148) | comYC | 119473..119799 (+) | 327 | WP_138124408.1 | competence type IV pilus major pilin ComGC | Machinery gene |
| FGL18_RS00735 (NCTC6403_00149) | comGD | 119774..120202 (+) | 429 | WP_256867133.1 | competence type IV pilus minor pilin ComGD | - |
| FGL18_RS00740 (NCTC6403_00150) | comGE | 120210..120455 (+) | 246 | WP_242002881.1 | competence type IV pilus minor pilin ComGE | - |
| FGL18_RS00745 (NCTC6403_00151) | comGF | 120436..120876 (+) | 441 | WP_138124417.1 | competence type IV pilus minor pilin ComGF | - |
| FGL18_RS00750 (NCTC6403_00152) | comGG | 120854..121228 (+) | 375 | WP_138124420.1 | competence type IV pilus minor pilin ComGG | - |
| FGL18_RS00755 (NCTC6403_00153) | comYH | 121291..122244 (+) | 954 | WP_138124423.1 | class I SAM-dependent methyltransferase | Machinery gene |
| FGL18_RS00760 (NCTC6403_00154) | - | 122303..123499 (+) | 1197 | WP_084916957.1 | acetate kinase | - |
| FGL18_RS00765 (NCTC6403_00155) | - | 123804..124010 (+) | 207 | WP_003058508.1 | helix-turn-helix transcriptional regulator | - |
| FGL18_RS00770 (NCTC6403_00156) | - | 124113..124793 (+) | 681 | WP_138124426.1 | type II CAAX endopeptidase family protein | - |
| FGL18_RS00775 (NCTC6403_00157) | - | 124811..125248 (+) | 438 | WP_138124429.1 | hypothetical protein | - |
| FGL18_RS00780 (NCTC6403_00158) | proC | 125387..126163 (-) | 777 | WP_138124432.1 | pyrroline-5-carboxylate reductase | - |
Sequence
Protein
Download Length: 317 a.a. Molecular weight: 36004.97 Da Isoelectric Point: 4.7910
>NTDB_id=1127776 FGL18_RS00755 WP_138124423.1 121291..122244(+) (comYH) [Streptococcus dysgalactiae strain NCTC6403]
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVAVITLPDSMVGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
MNFEKIEEAYQLLLENSQLIENDLKTHIYDAIVEQNSFYLGAEGASPQVAQNINKLKALHLTKEEWRRAYQFIFIKAAQT
EQLQANHQFTPDAIGFILLYLLEQLSDKDSLEVLEIGSGTGNLAQTLLNNTSKKLDYVGIELDDLLIDLSASIAEVMDSS
ARFIQEDAVRPQLLKESDVVISDLPVGYYPNDDIAKRYKVASSEEHTYAHHLLMEQSLKYLKKDGFAIFLAPVNLLTSSQ
SQLLKNWLTGYAQVVAVITLPDSMVGHPSNAKSIIVLQKQTDHPMETFVYPIRDLKLAENIHDFMQNFKKWKQDNVN
Nucleotide
Download Length: 954 bp
>NTDB_id=1127776 FGL18_RS00755 WP_138124423.1 121291..122244(+) (comYH) [Streptococcus dysgalactiae strain NCTC6403]
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTATATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGGATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCGTGATTACTCTACCAGATTCTATGGTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCCATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
ATGAATTTTGAAAAAATTGAAGAAGCCTATCAGTTACTTTTAGAGAATAGTCAACTGATTGAAAATGATCTAAAAACACA
TATTTATGATGCCATCGTTGAGCAAAACTCTTTTTATTTAGGTGCTGAGGGAGCTAGTCCTCAAGTTGCCCAGAACATTA
ACAAACTGAAAGCCTTACACCTGACTAAAGAAGAATGGCGTAGAGCTTACCAGTTTATTTTTATTAAGGCAGCTCAGACT
GAGCAGCTCCAAGCAAACCATCAGTTCACGCCAGATGCTATTGGTTTCATTCTGCTATATCTTTTGGAACAATTGAGTGA
CAAAGATAGCCTAGAAGTCCTTGAAATTGGCAGTGGTACGGGAAATCTAGCACAAACTCTCCTCAATAATACGAGTAAGA
AACTTGATTATGTAGGGATTGAACTTGACGACCTCTTAATTGATTTATCAGCAAGTATTGCTGAAGTAATGGACTCTTCA
GCTCGTTTTATTCAAGAAGATGCGGTAAGACCGCAATTGTTAAAAGAAAGCGATGTTGTTATCAGTGACTTGCCAGTGGG
TTATTATCCTAATGATGACATTGCTAAGCGCTATAAGGTAGCTAGTTCTGAGGAACACACCTATGCTCATCATTTACTCA
TGGAACAATCTTTAAAGTATTTGAAAAAAGATGGTTTTGCCATTTTCTTGGCACCTGTCAATTTGTTGACAAGCTCTCAG
AGCCAATTGTTGAAAAATTGGTTAACTGGCTATGCCCAGGTAGTGGCCGTGATTACTCTACCAGATTCTATGGTTGGTCA
TCCCTCTAATGCTAAGTCCATTATTGTCTTGCAAAAGCAGACAGACCATCCGATGGAAACCTTTGTTTATCCCATTCGAG
ACTTGAAACTTGCAGAGAATATTCATGACTTTATGCAAAATTTCAAAAAATGGAAACAGGATAATGTCAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comYH | Streptococcus mutans UA140 |
66.139 |
99.685 |
0.659 |
| comYH | Streptococcus mutans UA159 |
65.823 |
99.685 |
0.656 |