Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   FGL05_RS08935 Genome accession   NZ_LR594044
Coordinates   1777605..1778387 (-) Length   260 a.a.
NCBI ID   WP_020917670.1    Uniprot ID   A0AB33AQ01
Organism   Streptococcus lutetiensis strain NCTC8796     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1772605..1783387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL05_RS08915 (NCTC8796_01870) - 1773628..1773819 (-) 192 WP_020915953.1 DUF951 domain-containing protein -
  FGL05_RS08920 - 1773830..1774620 (-) 791 Protein_1719 diacylglycerol kinase family protein -
  FGL05_RS08925 (NCTC8796_01874) dnaN 1774751..1775887 (-) 1137 WP_020915952.1 DNA polymerase III subunit beta -
  FGL05_RS08930 (NCTC8796_01875) dnaA 1776046..1777401 (-) 1356 WP_020915951.1 chromosomal replication initiator protein DnaA -
  FGL05_RS08935 (NCTC8796_01876) spo0J 1777605..1778387 (-) 783 WP_020917670.1 ParB/RepB/Spo0J family partition protein Regulator
  FGL05_RS08940 (NCTC8796_01877) htrA 1778455..1779705 (-) 1251 WP_020917669.1 trypsin-like peptidase domain-containing protein Regulator
  FGL05_RS08945 (NCTC8796_01878) rlmH 1779920..1780399 (+) 480 WP_020917668.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FGL05_RS08965 - 1781237..1782575 (-) 1339 Protein_1725 IS3 family transposase -

Sequence

Protein


Download         Length: 260 a.a.        Molecular weight: 29824.64 Da        Isoelectric Point: 9.6238

>NTDB_id=1127707 FGL05_RS08935 WP_020917670.1 1777605..1778387(-) (spo0J) [Streptococcus lutetiensis strain NCTC8796]
MIETLNLIPIDDIAPNPYQPRLKFKPEELEELSRSIKANGLIQPIIVRKSDIFGYELIAGERRLKASKMAGLSEIPAIIK
DITNKESMQLAIVENLQRSDLNPIEEAKAYQQLLDKNQMTHEELAQFMGKSRPYITNCLRLLNLPTIISHAVEKGELSQG
HARVLLTLKDEKEQEKWYQKILNEDMSVRKLEQAVKSTKKKKTSSKVSKKDIFIRHQEEELSKLLGLPVTLSLSKSGFKG
DLQLHFQSEEDLNRIINRLK

Nucleotide


Download         Length: 783 bp        

>NTDB_id=1127707 FGL05_RS08935 WP_020917670.1 1777605..1778387(-) (spo0J) [Streptococcus lutetiensis strain NCTC8796]
ATGATTGAAACACTTAATCTCATACCTATTGACGATATTGCACCAAATCCTTATCAACCTCGCTTGAAATTTAAACCAGA
AGAATTAGAAGAACTTTCTCGCTCAATAAAGGCAAACGGCCTCATACAGCCGATAATCGTCCGTAAATCAGATATTTTTG
GTTATGAGCTCATTGCAGGCGAAAGACGTCTTAAAGCATCAAAAATGGCTGGTTTAAGCGAAATTCCTGCAATTATAAAA
GATATTACTAATAAAGAAAGCATGCAGCTTGCTATTGTCGAAAATTTGCAGCGCTCTGACCTTAATCCTATTGAAGAAGC
CAAGGCTTATCAGCAATTGCTCGATAAAAATCAAATGACCCATGAAGAATTAGCACAATTTATGGGAAAATCTCGTCCTT
ATATTACGAATTGCTTGCGCTTATTGAATTTACCGACGATTATTTCTCATGCCGTCGAAAAAGGTGAACTTTCTCAAGGA
CATGCGCGTGTGCTGCTGACACTTAAGGACGAAAAAGAGCAGGAGAAGTGGTACCAAAAAATTCTGAACGAGGATATGAG
CGTTCGCAAACTCGAACAAGCTGTAAAATCTACTAAAAAGAAAAAAACATCTTCTAAAGTAAGCAAAAAAGATATTTTTA
TCCGTCATCAAGAAGAAGAATTATCAAAATTATTAGGTCTTCCTGTCACCTTATCACTTTCTAAAAGTGGCTTTAAAGGA
GACTTACAATTACATTTTCAATCAGAAGAAGACTTAAACAGAATTATCAACAGGCTAAAATAG

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(148-196)

ParB/Sulfiredoxin domain (ParB_N)

(8-95)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.538

100

0.615

Multiple sequence alignment