Detailed information NTG1127577

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: FGL06_RS05305
• Genome accession: NZ_LR594042
• Coordinates: 1048197..1049426 (-)
• Length: 409 a.a.
• NCBI ID: WP_024343987.1
• Uniprot ID: -
• Organism: Streptococcus equinus strain NCTC8133
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1043197..1054426

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL06_RS05285 (NCTC8133_01069)	-	1044420..1045088 (+)	669	WP_029875966.1	DUF1275 family protein	-
FGL06_RS05290 (NCTC8133_01070)	mmuM	1045123..1046067 (-)	945	WP_126437889.1	homocysteine S-methyltransferase	-
FGL06_RS05295 (NCTC8133_01071)	-	1046080..1047456 (-)	1377	WP_074483566.1	amino acid permease	-
FGL06_RS05300 (NCTC8133_01072)	yihA	1047594..1048187 (-)	594	WP_004232043.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
FGL06_RS05305 (NCTC8133_01073)	clpX	1048197..1049426 (-)	1230	WP_024343987.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
FGL06_RS05315 (NCTC8133_01075)	-	1049649..1050143 (-)	495	WP_126437890.1	dihydrofolate reductase	-
FGL06_RS05320 (NCTC8133_01076)	-	1050227..1051066 (-)	840	WP_021142433.1	thymidylate synthase	-
FGL06_RS05325 (NCTC8133_01077)	-	1051396..1052574 (+)	1179	WP_045797846.1	hydroxymethylglutaryl-CoA synthase	-
FGL06_RS05330 (NCTC8133_01078)	-	1052561..1053835 (+)	1275	WP_126437891.1	hydroxymethylglutaryl-CoA reductase, degradative	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45200.64 Da
• Isoelectric Point: 4.4317

>NTDB_id=1127577 FGL06_RS05305 WP_024343987.1 1048197..1049426(-) (clpX) [Streptococcus equinus strain NCTC8133]
MVGNRTNDVKVYCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLAEVPKPKELLATLDEYVVGQER
AKRALAVAVYNHYKRVSFAESRDEEDVELQKSNILLIGPTGSGKTFLAQTLAKSLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADFNIERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEDIVKQRLGEKIIGFGQNNRKIDEDASYMQEIISEDIQKFGLIPEFIGRLPVVAALEQLTADDLVRI
LTEPRNALVKQYQTLLSYDGVELEFDEDALQAIANKAIERKTGARGLRSIIEETMMDIMFEIPSREEVTKVRITKDAVEG
TDKPILETA

Nucleotide

• Length: 1230 bp

>NTDB_id=1127577 FGL06_RS05305 WP_024343987.1 1048197..1049426(-) (clpX) [Streptococcus equinus strain NCTC8133]
ATGGTTGGAAATCGAACAAATGATGTAAAAGTTTATTGCTCATTTTGTGGAAAAAGCCAAGACGAAGTAAAAAAAATTAT
TGCAGGAAATAATGTTTTTATTTGTAATGAATGTGTGGCTTTATCCCAAGAGATTATTAAAGAAGAATTAGCAGAAGAAG
TTCTTGCAGATTTGGCAGAAGTTCCAAAACCAAAAGAATTACTAGCTACCCTTGATGAATATGTTGTTGGTCAAGAACGT
GCAAAACGTGCTCTTGCAGTAGCAGTTTACAATCACTACAAGCGTGTATCTTTTGCTGAAAGTCGTGATGAAGAAGATGT
TGAATTGCAAAAATCAAACATTTTGCTTATCGGACCAACAGGGTCAGGGAAAACTTTCCTTGCTCAAACATTGGCTAAAA
GTCTTAATGTTCCATTTGCGATTGCAGATGCGACATCATTGACTGAAGCAGGATATGTCGGTGAAGACGTTGAAAATATC
CTTTTGAAACTGATTCAAGCAGCTGATTTTAATATTGAACGTGCTGAACGTGGTATTATCTACGTCGATGAAATTGATAA
AATCGCCAAAAAAGGTGAAAATGTTTCAATTACTCGTGACGTTTCAGGTGAGGGTGTTCAACAAGCTCTCCTTAAAATCA
TTGAAGGAACTGTTGCTAGCGTACCACCACAAGGTGGACGTAAACACCCTAACCAAGAAATGATTCAAATTGATACCAAG
AATATCCTTTTCATCGTTGGTGGTGCGTTTGATGGTATCGAAGATATTGTTAAACAACGTCTTGGTGAAAAAATTATTGG
TTTTGGTCAAAATAACCGTAAAATTGATGAAGATGCATCTTATATGCAAGAAATCATCTCAGAAGATATTCAAAAATTTG
GTCTTATTCCAGAGTTTATCGGACGCTTGCCTGTAGTAGCTGCGCTTGAACAATTGACTGCGGATGATTTGGTTCGTATC
TTGACTGAACCTCGCAATGCCTTGGTTAAACAATACCAAACATTGCTATCTTATGATGGTGTTGAGTTGGAATTTGATGA
AGATGCTCTTCAAGCAATTGCTAATAAAGCTATCGAACGTAAGACAGGTGCGCGTGGACTTCGTTCAATTATTGAAGAAA
CAATGATGGATATCATGTTTGAAATTCCTAGTCGCGAAGAAGTTACCAAAGTTCGCATCACTAAAGATGCTGTCGAAGGT
ACTGATAAACCTATCTTAGAAACTGCATAA

Domains

Predicted by InterproScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	90.22	100	0.902
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.853	98.044	0.577