Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   FGK97_RS09635 Genome accession   NZ_LR594037
Coordinates   1903542..1904309 (+) Length   255 a.a.
NCBI ID   WP_021002248.1    Uniprot ID   A0AAP6EPV9
Organism   Streptococcus anginosus strain NCTC11064     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1898542..1909309
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK97_RS09605 (NCTC11064_01970) comE 1899107..1899856 (-) 750 WP_021002244.1 competence system response regulator transcription factor ComE Regulator
  FGK97_RS09610 (NCTC11064_01971) comD/comD2 1899856..1901178 (-) 1323 WP_021002245.1 GHKL domain-containing protein Regulator
  FGK97_RS09615 (NCTC11064_01972) - 1901193..1901342 (-) 150 WP_021002246.1 bacteriocin -
  FGK97_RS09625 (NCTC11064_01974) rlmH 1901624..1902103 (-) 480 WP_041784074.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  FGK97_RS09630 (NCTC11064_01975) htrA 1902297..1903487 (+) 1191 WP_021002247.1 S1C family serine protease Regulator
  FGK97_RS09635 (NCTC11064_01976) spo0J 1903542..1904309 (+) 768 WP_021002248.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29696.21 Da        Isoelectric Point: 8.0359

>NTDB_id=1127449 FGK97_RS09635 WP_021002248.1 1903542..1904309(+) (spo0J) [Streptococcus anginosus strain NCTC11064]
MEKYQYIELKDIQTNPYQPRKEFSEEKITELANSIKEHGIIQPIIVRKSPIIGYELLAGERRFRAAKLAGLQNIPAIIKE
LTDDEMMKQAIIENLQREDLNPIEEAQSYQYLIDKGLTHKEIAQTMGKSRPYITNSVRLLNLPLNIIEAIKEGNISQGHA
RLLINLSEKEQNLWFDKILSQELSVRQLEKQLHSKQAKTVTKDKQQLFLKEEEKKLKKIFGTEISLQFSEQSQSGKICIH
FSNLEEYQRIIDSFK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1127449 FGK97_RS09635 WP_021002248.1 1903542..1904309(+) (spo0J) [Streptococcus anginosus strain NCTC11064]
ATGGAAAAATATCAATATATTGAACTTAAGGACATTCAAACTAATCCTTATCAACCAAGAAAAGAATTTTCAGAAGAAAA
AATTACTGAACTTGCTAATTCTATAAAAGAACATGGGATTATTCAGCCTATCATCGTACGAAAATCTCCAATAATTGGTT
ATGAATTACTAGCTGGTGAAAGACGTTTTAGAGCTGCTAAATTAGCAGGCTTACAAAATATACCAGCTATTATAAAAGAA
TTAACAGATGATGAAATGATGAAGCAAGCTATCATCGAAAATTTACAACGAGAAGATTTAAATCCTATAGAAGAAGCACA
ATCTTACCAATATTTAATTGACAAAGGATTGACGCATAAAGAAATCGCTCAAACTATGGGAAAATCACGTCCTTATATTA
CAAATTCTGTCCGATTATTAAATTTACCTCTCAATATTATTGAAGCGATAAAAGAAGGAAATATTTCTCAAGGACATGCT
CGTCTGCTCATCAATCTCTCAGAGAAAGAGCAAAATCTGTGGTTTGATAAAATCCTATCTCAAGAACTTTCAGTTCGGCA
GTTAGAAAAACAATTGCATTCCAAACAAGCAAAAACAGTAACAAAAGATAAACAGCAACTCTTCCTCAAAGAGGAAGAGA
AAAAATTAAAAAAGATATTTGGTACAGAGATTTCTCTTCAATTTTCTGAACAATCTCAATCAGGGAAAATTTGTATTCAT
TTTTCAAACCTAGAAGAATATCAAAGAATTATTGACAGCTTTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

54.118

100

0.541


Multiple sequence alignment