Detailed information NTG1127345

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: FGK96_RS05325
• Genome accession: NZ_LR594036
• Coordinates: 1125482..1126711 (-)
• Length: 409 a.a.
• NCBI ID: WP_138082030.1
• Uniprot ID: -
• Organism: Streptococcus porcinus strain NCTC10710
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1120482..1131711

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK96_RS05305 (NCTC10710_01093)	rplJ	1120819..1121319 (-)	501	WP_138082022.1	50S ribosomal protein L10	-
FGK96_RS05310 (NCTC10710_01095)	-	1121728..1123827 (+)	2100	WP_138082024.1	AAA family ATPase	-
FGK96_RS05315 (NCTC10710_01096)	-	1124047..1124763 (-)	717	WP_138082026.1	hypothetical protein	-
FGK96_RS05320 (NCTC10710_01097)	yihA	1124870..1125469 (-)	600	WP_138082028.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
FGK96_RS05325 (NCTC10710_01098)	clpX	1125482..1126711 (-)	1230	WP_138082030.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
FGK96_RS05330 (NCTC10710_01099)	-	1126742..1126912 (-)	171	WP_003083300.1	hypothetical protein	-
FGK96_RS05335 (NCTC10710_01100)	-	1126938..1127435 (-)	498	WP_138082032.1	dihydrofolate reductase	-
FGK96_RS05340 (NCTC10710_01101)	-	1127514..1128353 (-)	840	WP_138082034.1	thymidylate synthase	-
FGK96_RS05345 (NCTC10710_01102)	-	1128553..1129725 (+)	1173	WP_138082036.1	hydroxymethylglutaryl-CoA synthase	-
FGK96_RS05350 (NCTC10710_01103)	-	1129715..1130992 (+)	1278	WP_138082038.1	hydroxymethylglutaryl-CoA reductase, degradative	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 44994.44 Da
• Isoelectric Point: 4.4921

>NTDB_id=1127345 FGK96_RS05325 WP_138082030.1 1125482..1126711(-) (clpX) [Streptococcus porcinus strain NCTC10710]
MAGNRSTDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLETLNQYVVGQDR
AKRALAVAVYNHYKRVSFAESRDDEEVELQKSNILMIGPTGSGKTFLAQTLAKTLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDEDASYMQEIISEDIQTFGLIPEFIGRLPVVAALEQLSTNDLVKI
LTEPKNALVKQYQTLLSYDGVELTFDQEALDAIAEKAIARKTGARGLRSIIEETMLDLMFEIPSQEDVTKVRITKDAVDG
NAKPILEIA

Nucleotide

• Length: 1230 bp

>NTDB_id=1127345 FGK96_RS05325 WP_138082030.1 1125482..1126711(-) (clpX) [Streptococcus porcinus strain NCTC10710]
ATGGCGGGAAATCGAAGTACTGATATCAAGGTTCATTGTTCATTTTGTGGCAAGAGTCAAGATGAAGTCAAAAAAATTAT
AGCAGGTAACAATGTCTTTATTTGTAATGAATGTGTTGCTCTGTCACAAGAAATCATTAAAGAAGAATTAGCTGAGGAAG
TATTAGCTGATTTGACAGAAGTTCCTAAACCGAAAGAGTTATTAGAGACACTAAATCAATATGTGGTTGGTCAAGACCGT
GCAAAAAGGGCTTTGGCGGTAGCTGTTTATAACCATTACAAACGAGTTTCTTTTGCAGAAAGTCGCGATGATGAAGAAGT
GGAACTACAAAAATCAAATATTTTAATGATTGGTCCAACCGGTTCTGGGAAAACATTCCTTGCTCAAACATTAGCTAAGA
CCTTAAATGTTCCTTTTGCTATTGCGGATGCTACCTCTTTGACCGAGGCTGGCTACGTAGGTGAGGATGTTGAAAATATT
TTATTGAAACTGATTCAAGCAGCAGACTACAATGTTGAGCGTGCTGAACGTGGTATCATCTATGTAGATGAGATTGATAA
AATTGCCAAAAAAGGTGAAAATGTTTCAATTACTCGTGATGTATCAGGAGAAGGAGTTCAACAAGCTCTCTTGAAAATAA
TTGAAGGAACTGTCGCTTCTGTTCCTCCACAAGGTGGCCGTAAACATCCTAATCAAGAAATGATACAGATTGATACCAAA
AATATTTTGTTTATCGTGGGCGGTGCTTTTGACGGTATTGAAGAAATCGTTAAACAAAGATTGGGAGAAAAAATTATTGG
TTTTGGGCAAAACAGTCGCAAAATTGATGAAGATGCTTCCTATATGCAAGAAATTATTTCTGAAGATATCCAAACCTTTG
GTTTAATTCCGGAGTTCATTGGAAGGTTACCAGTTGTTGCTGCCTTAGAGCAGCTTAGCACCAATGATTTAGTGAAAATA
CTAACTGAGCCAAAGAATGCACTTGTCAAACAATATCAAACCTTACTGTCTTACGATGGCGTGGAGTTGACCTTTGATCA
AGAAGCTTTAGATGCAATTGCGGAAAAAGCGATTGCTCGTAAAACGGGAGCTCGTGGCTTACGCTCAATTATTGAAGAGA
CAATGTTAGATCTCATGTTTGAAATACCTAGCCAAGAAGATGTGACCAAAGTACGTATTACGAAAGATGCTGTTGATGGG
AATGCAAAACCAATCCTGGAAATAGCTTAA

Domains

Predicted by InterproScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	89.242	100	0.892
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	59.102	98.044	0.579