Detailed information NTG1127298

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: FGL04_RS04745
• Genome accession: NZ_LR594035
• Coordinates: 888925..890154 (+)
• Length: 409 a.a.
• NCBI ID: WP_138069156.1
• Uniprot ID: -
• Organism: Streptococcus pseudoporcinus strain NCTC5385
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 883925..895154

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGL04_RS04720 (NCTC5385_01023)	-	884643..885863 (-)	1221	WP_416236985.1	hydroxymethylglutaryl-CoA reductase, degradative	-
FGL04_RS04725 (NCTC5385_01024)	-	885910..887082 (-)	1173	WP_138068389.1	hydroxymethylglutaryl-CoA synthase	-
FGL04_RS04730 (NCTC5385_01025)	-	887283..888122 (+)	840	WP_138068390.1	thymidylate synthase	-
FGL04_RS04735 (NCTC5385_01026)	-	888202..888699 (+)	498	WP_007894152.1	dihydrofolate reductase	-
FGL04_RS04745 (NCTC5385_01028)	clpX	888925..890154 (+)	1230	WP_138069156.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
FGL04_RS04750 (NCTC5385_01029)	yihA	890167..890766 (+)	600	WP_138068391.1	ribosome biogenesis GTP-binding protein YihA/YsxC	-
FGL04_RS04755 (NCTC5385_01030)	-	890888..891604 (+)	717	WP_138068392.1	hypothetical protein	-
FGL04_RS04760 (NCTC5385_01031)	-	891852..893951 (-)	2100	WP_138068393.1	AAA family ATPase	-
FGL04_RS04765 (NCTC5385_01033)	rplJ	894356..894856 (+)	501	WP_138068394.1	50S ribosomal protein L10	-

Sequence

Protein

• Length: 409 a.a.
• Molecular weight: 45007.56 Da
• Isoelectric Point: 4.5899

>NTDB_id=1127298 FGL04_RS04745 WP_138069156.1 888925..890154(+) (clpX) [Streptococcus pseudoporcinus strain NCTC5385]
MAGNRSTDIKVHCSFCGKSQDEVKKIIAGNNVFICNECVALSQEIIKEELAEEVLADLTEVPKPKELLETLNQYVVGQDR
AKRALAVAVYNHYKRVSFAESRDDEEVKLQKSNILMIGPTGSGKTFLAQTLAKTLNVPFAIADATSLTEAGYVGEDVENI
LLKLIQAADYNVERAERGIIYVDEIDKIAKKGENVSITRDVSGEGVQQALLKIIEGTVASVPPQGGRKHPNQEMIQIDTK
NILFIVGGAFDGIEEIVKQRLGEKIIGFGQNSRKIDEDASYMQEIISEDIQTFGLIPEFIGRLPVVAALEQLNTKDLVKI
LTEPKNALVKQYQTLLSYDGVELTFDQEALDAIAEKAIARKTGARGLRSIIEETMLDLMFEIPSQEDVTKVRITKDAVDG
TAKPILDIA

Nucleotide

• Length: 1230 bp

>NTDB_id=1127298 FGL04_RS04745 WP_138069156.1 888925..890154(+) (clpX) [Streptococcus pseudoporcinus strain NCTC5385]
ATGGCTGGAAATCGAAGTACTGATATCAAGGTTCATTGTTCATTTTGTGGTAAAAGCCAGGATGAAGTCAAAAAAATTAT
AGCAGGTAACAATGTTTTTATTTGCAATGAATGTGTTGCTCTGTCACAAGAAATTATTAAAGAAGAATTGGCTGAGGAAG
TGTTAGCTGATTTGACAGAAGTACCTAAACCGAAAGAATTATTAGAGACACTAAACCAATATGTGGTTGGTCAAGATCGT
GCAAAGAGGGCTTTGGCGGTAGCTGTTTATAACCATTACAAGCGTGTTTCTTTTGCGGAAAGCCGCGATGATGAAGAAGT
GAAACTACAAAAATCAAATATTTTGATGATTGGTCCAACCGGTTCTGGGAAAACATTCCTAGCTCAAACATTAGCCAAGA
CCTTAAATGTTCCTTTTGCTATTGCGGATGCTACCTCCTTGACTGAGGCTGGTTACGTAGGTGAAGACGTTGAGAATATT
TTATTGAAGCTGATTCAAGCGGCAGACTATAATGTTGAGCGCGCTGAACGTGGAATCATCTATGTTGATGAGATTGATAA
AATTGCTAAAAAAGGCGAAAATGTTTCGATTACTCGTGATGTATCGGGAGAAGGAGTTCAACAAGCTCTCTTGAAAATTA
TTGAAGGAACCGTTGCTTCTGTCCCCCCACAAGGTGGCCGTAAACATCCGAATCAAGAAATGATACAGATTGATACCAAA
AATATTTTGTTTATCGTTGGTGGTGCATTTGATGGTATTGAAGAGATTGTTAAGCAAAGACTAGGAGAAAAAATTATTGG
CTTTGGGCAAAACAGTCGTAAAATCGATGAAGATGCTTCCTATATGCAGGAAATTATTTCTGAGGATATCCAGACCTTTG
GTTTAATTCCAGAGTTCATCGGGCGGTTACCAGTTGTTGCTGCCTTAGAGCAACTTAATACTAAGGATTTAGTGAAAATA
CTAACTGAACCAAAGAATGCTCTTGTCAAACAATATCAAACCTTACTATCTTATGATGGTGTAGAACTAACCTTCGACCA
GGAAGCTTTAGATGCCATTGCAGAAAAAGCCATTGCCCGTAAAACGGGAGCGCGTGGATTACGCTCAATCATTGAAGAGA
CAATGTTGGATCTCATGTTTGAAATCCCTAGCCAGGAAGATGTAACTAAAGTACGTATTACAAAAGATGCTGTTGATGGA
ACTGCGAAACCAATCTTGGATATAGCTTAA

Domains

Predicted by InterproScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (12-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (110-305)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (312-390)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	89.242	100	0.892
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	58.853	98.044	0.577