Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   PFLUOLIPICF7_RS10060 Genome accession   NZ_CP005975
Coordinates   2207760..2208167 (+) Length   135 a.a.
NCBI ID   WP_010207217.1    Uniprot ID   -
Organism   Pseudomonas simiae strain PICF7     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 2202760..2213167
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PFLUOLIPICF7_RS10030 (PFLUOLIPICF7_10080) - 2202893..2203897 (-) 1005 WP_045791533.1 aspartate carbamoyltransferase catalytic subunit -
  PFLUOLIPICF7_RS10035 (PFLUOLIPICF7_10085) pyrR 2203922..2204428 (-) 507 WP_010207223.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  PFLUOLIPICF7_RS10040 (PFLUOLIPICF7_10090) ruvX 2204510..2204947 (-) 438 WP_003195067.1 Holliday junction resolvase RuvX -
  PFLUOLIPICF7_RS10045 (PFLUOLIPICF7_10095) - 2204947..2205516 (-) 570 WP_010207221.1 YqgE/AlgH family protein -
  PFLUOLIPICF7_RS10050 (PFLUOLIPICF7_10100) - 2205584..2206489 (-) 906 WP_010207219.1 energy transducer TonB -
  PFLUOLIPICF7_RS10055 (PFLUOLIPICF7_10105) gshB 2206567..2207520 (-) 954 WP_010207218.1 glutathione synthase -
  PFLUOLIPICF7_RS10060 (PFLUOLIPICF7_10110) pilG 2207760..2208167 (+) 408 WP_010207217.1 twitching motility response regulator PilG Regulator
  PFLUOLIPICF7_RS10065 (PFLUOLIPICF7_10115) pilH 2208214..2208579 (+) 366 WP_010207216.1 twitching motility response regulator PilH -
  PFLUOLIPICF7_RS10070 (PFLUOLIPICF7_10120) - 2208592..2209116 (+) 525 WP_045791534.1 chemotaxis protein CheW -
  PFLUOLIPICF7_RS10075 (PFLUOLIPICF7_10125) - 2209113..2211164 (+) 2052 WP_010207214.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14892.38 Da        Isoelectric Point: 7.3841

>NTDB_id=112727 PFLUOLIPICF7_RS10060 WP_010207217.1 2207760..2208167(+) (pilG) [Pseudomonas simiae strain PICF7]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKDELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=112727 PFLUOLIPICF7_RS10060 WP_010207217.1 2207760..2208167(+) (pilG) [Pseudomonas simiae strain PICF7]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAGACGATCCGCCGCACCGCTGAAACTTTGTT
GAAGAATGTGGGATGCGATGTCATCACGGCCATCGACGGTTTCGATGCCCTGGCTCGGATTGTCGATCATCACCCGCACA
TTATTTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCACTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGTTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATTGTCGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGACGAACTGCTGGGTGCGATCAAGGCCTACGTGCCGGGGTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

71.2

92.593

0.659
  vicR Streptococcus mutans UA159

38.889

93.333

0.363

Multiple sequence alignment