Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   FGL00_RS02915 Genome accession   NZ_LR594034
Coordinates   549009..549818 (+) Length   269 a.a.
NCBI ID   WP_003059746.1    Uniprot ID   -
Organism   Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 544009..554818
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL00_RS02890 (NCTC8546_00593) - 544383..545084 (-) 702 WP_012766679.1 amino acid ABC transporter permease -
  FGL00_RS02895 (NCTC8546_00594) - 545098..545898 (-) 801 WP_003057243.1 transporter substrate-binding domain-containing protein -
  FGL00_RS02900 - 545898..546691 (-) 794 Protein_511 amino acid ABC transporter ATP-binding protein -
  FGL00_RS02905 (NCTC8546_00597) vicR 546950..547660 (+) 711 WP_138098294.1 response regulator YycF Regulator
  FGL00_RS02910 (NCTC8546_00598) vicK 547653..549005 (+) 1353 WP_138098296.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FGL00_RS02915 (NCTC8546_00599) vicX 549009..549818 (+) 810 WP_003059746.1 MBL fold metallo-hydrolase Regulator
  FGL00_RS02920 (NCTC8546_00600) rnc 550576..551268 (+) 693 WP_003057240.1 ribonuclease III -
  FGL00_RS02925 (NCTC8546_00601) smc 551269..554814 (+) 3546 WP_003057203.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30157.38 Da        Isoelectric Point: 6.0739

>NTDB_id=1127239 FGL00_RS02915 WP_003059746.1 549009..549818(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDMGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLAVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1127239 FGL00_RS02915 WP_003059746.1 549009..549818(+) (vicX) [Streptococcus dysgalactiae subsp. equisimilis strain NCTC8546]
ATGATTGAAAGTGGTTTTAAATACAGTATTTTAGCATCCGGATCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGATTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACACATGAACATTCAGATCATATCAAGGGAGTGGGAGTGATGGCTCGCAAGTACCATTTGGAT
GTTTATGCCAACGAAAAAACATGGCAGTTGATGGATGAGCGTAATATGCTCGGGAAGCTTGATGCCTCCCAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGCGTTAGTCACGATGCGGTTGATCCTC
AGTTTTACCGCATTATGAAGGACAACAAATCGTTTGTGATGCTGACTGATACAGGTTATGTCAGTGACCGAATGACAGGT
ATTATTGAAAATGCAGATGGCTACTTGATTGAGTCCAATCATGACATTGAAATTTTACGGTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGACATGGGCCATTTGTCAAATGAAGATGGCGCTGGAGCTATGATTAGAAGTTTAGGGC
ATAAGACCAAAAAAATCTATTTGGGCCATTTGAGCAAAGAAAATAACATCAAAGAGTTGGCTCACATGACCATGGTGAAC
CAATTAGCCATGGCAGATTTAGCGGTAGGTACAGACTTTACTGTTCATGACACTTCCCCAGACACAGCTTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-217)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.58

100

0.766

Multiple sequence alignment