Detailed information    

insolico Bioinformatically predicted

Overview


Name   vicK   Type   Regulator
Locus tag   FGK95_RS02835 Genome accession   NZ_LR590625
Coordinates   529161..530513 (+) Length   450 a.a.
NCBI ID   WP_093998382.1    Uniprot ID   -
Organism   Streptococcus canis strain B700072     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 524161..535513
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK95_RS02805 (SAMEA5186854_00556) dhaL 524737..525312 (+) 576 WP_093998386.1 dihydroxyacetone kinase subunit DhaL -
  FGK95_RS02810 (SAMEA5186854_00557) dhaM 525312..525686 (+) 375 WP_003047188.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  FGK95_RS02815 (SAMEA5186854_00558) - 525700..526410 (+) 711 WP_093998385.1 MIP/aquaporin family protein -
  FGK95_RS02825 (SAMEA5186854_00559) - 527283..528278 (+) 996 WP_138114078.1 DUF3114 domain-containing protein -
  FGK95_RS02830 (SAMEA5186854_00560) vicR 528458..529168 (+) 711 WP_003049952.1 response regulator YycF Regulator
  FGK95_RS02835 (SAMEA5186854_00561) vicK 529161..530513 (+) 1353 WP_093998382.1 cell wall metabolism sensor histidine kinase VicK Regulator
  FGK95_RS02840 (SAMEA5186854_00562) vicX 530517..531326 (+) 810 WP_003047202.1 MBL fold metallo-hydrolase Regulator
  FGK95_RS02845 (SAMEA5186854_00563) rnc 531428..532120 (+) 693 WP_093998381.1 ribonuclease III -

Sequence


Protein


Download         Length: 450 a.a.        Molecular weight: 51420.90 Da        Isoelectric Point: 5.3982

>NTDB_id=1127103 FGK95_RS02835 WP_093998382.1 529161..530513(+) (vicK) [Streptococcus canis strain B700072]
MTRDIIGNLSAFELAILLLLVFVAFYFIHLAVRDYRNARIVRMMSHKIRDLINGRYTDMINEKADIELMELADQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRSGKIIMINETARKQLNLTKEQALEKNITDLLEGDTPYTYRDLVSKTPV
VTVNSRNDMGEFVSLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALT
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLSVEMTNFTAFMTSILNRFDLVKNQHTGTGKVYEIVRDYPITS
VWLEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQHHGFIWAKSDYGKGSTFTIVLPYEKDAAIYEEWEEDID

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=1127103 FGK95_RS02835 WP_093998382.1 529161..530513(+) (vicK) [Streptococcus canis strain B700072]
ATGACTAGAGATATCATCGGGAATTTATCCGCTTTTGAATTAGCGATTCTCTTATTGCTTGTTTTTGTTGCCTTTTACTT
TATTCATTTAGCAGTGCGGGATTACCGCAATGCTCGTATTGTTCGAATGATGAGCCACAAGATCAGGGATCTGATCAATG
GTCGTTATACCGATATGATTAACGAAAAGGCTGACATTGAATTGATGGAATTGGCAGATCAATTAAACGATCTTTCAGAT
GTTTTTCGCTTAACCCATGAAAATCTTGCCCAGGAAAAAAATCGCTTGGCCAGCATTCTGGCCTATATGTCAGATGGCGT
ACTTGCCACAGACCGTTCTGGGAAAATCATCATGATTAACGAGACTGCCCGCAAGCAGCTTAATCTGACCAAGGAGCAGG
CTCTTGAAAAGAACATTACAGATTTGTTAGAGGGGGATACGCCTTATACCTACCGTGACTTGGTGTCCAAAACACCAGTG
GTAACTGTTAATAGCCGAAATGATATGGGCGAATTTGTCTCATTGCGTCTGCGCTTTGCCTTGAACAGACGCGAAAGTGG
CTTTATTTCAGGCTTGGTCGTGGTTTTACATGACACCACAGAACAAGAAAAAGAAGAACGTGAACGCCGTCTTTTTGTTT
CCAATGTCAGCCATGAGCTTAGGACACCTTTGACCTCGGTTAAATCTTATTTAGAGGCCCTTGACGAAGGTGCCCTCACA
GAAGATATTGCGCCAAGCTTTATCAAGGTTTCTCTTGATGAGACCAATCGAATGATGCGAATGATTTCCGATCTTTTGAA
CCTGTCTCGCATTGATAACCAAGTGACCCAGTTGTCAGTCGAAATGACCAATTTCACAGCCTTTATGACCTCTATTCTGA
ACCGATTTGACCTAGTTAAAAACCAACATACGGGTACAGGCAAGGTCTATGAAATTGTGAGGGATTACCCCATTACTTCT
GTTTGGTTAGAAATTGACAATGACAAGATGACACAGGTTATTGAAAATATTCTTAATAATGCCATTAAATATTCTCCTGA
TGGTGGGAAAATCACTGTTCGCATGAAAACAACAGACACGCAGTTGATTATTTCCATTTCTGATCAGGGTCTCGGCATTC
CTAAAAAGGATTTGCCCCTTATTTTTGACCGATTTTACCGTGTGGACAAGGCAAGAAGTCGTGCCCAGGGCGGTACTGGA
CTAGGCCTTGCCATTGCTAAAGAAATTATCAAGCAGCATCACGGCTTCATCTGGGCTAAAAGTGATTATGGCAAGGGATC
AACCTTTACCATTGTCTTGCCTTATGAAAAAGATGCTGCCATTTATGAAGAATGGGAGGAAGATATAGATTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

74.155

92

0.682

  micB Streptococcus pneumoniae Cp1015

67.059

94.444

0.633


Multiple sequence alignment