Detailed information NTG1127096

Bioinformatically predicted

Overview

• Name: amiF
• Type: Regulator
• Locus tag: FGK95_RS01900
• Genome accession: NZ_LR590625
• Coordinates: 355415..356338 (+)
• Length: 307 a.a.
• NCBI ID: WP_093999413.1
• Uniprot ID: A0A3P5XSN6
• Organism: Streptococcus canis strain B700072
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 350415..361338

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
FGK95_RS01885 (SAMEA5186854_00373)	amiC	351915..353417 (+)	1503	WP_003046676.1	ABC transporter permease	Regulator
FGK95_RS01890 (SAMEA5186854_00374)	amiD	353417..354343 (+)	927	WP_093999415.1	oligopeptide ABC transporter permease OppC	Regulator
FGK95_RS01895 (SAMEA5186854_00375)	amiE	354352..355422 (+)	1071	WP_138114053.1	ABC transporter ATP-binding protein	Regulator
FGK95_RS01900 (SAMEA5186854_00376)	amiF	355415..356338 (+)	924	WP_093999413.1	ABC transporter ATP-binding protein	Regulator
FGK95_RS01905	-	356560..357511 (-)	952	Protein_320	IS30 family transposase	-

Sequence

Protein

• Length: 307 a.a.
• Molecular weight: 34664.94 Da
• Isoelectric Point: 7.1463

>NTDB_id=1127096 FGK95_RS01900 WP_093999413.1 355415..356338(+) (amiF) [Streptococcus canis strain B700072]
MSEKLVEVKDLEISFGEGKKKFVAVKNANFFIKKGETFSLVGESGSGKTTIGRAIIGLNDTSSGQILYDGKVINGRKSKS
EANELIRKIQMIFQDPAASLNERATVDYIISEGLYNFNLFKTEEERKEKIKTMMAEVGLLSEHLTRYPHEFSGGQRQRIG
IARALVMNPEFVIADEPISALDVSVRAQVLNLLKRMQAEKGLTYLFIAHDLSVVRFISDRIAVIHKGVIVEVAETEELFN
NPIHPYTKSLLSAVPIPDPILERQKELVVYNPDQHDYTVDKPSMVEIKPNHFVWANQAEIKKYQKEL

Nucleotide

• Length: 924 bp

>NTDB_id=1127096 FGK95_RS01900 WP_093999413.1 355415..356338(+) (amiF) [Streptococcus canis strain B700072]
ATGTCTGAGAAGTTAGTCGAAGTTAAAGACCTAGAAATTTCCTTTGGAGAGGGAAAGAAAAAATTTGTTGCGGTTAAGAA
TGCCAATTTCTTCATTAAAAAAGGGGAAACCTTCTCTTTAGTTGGAGAATCTGGTAGCGGAAAAACAACCATTGGTCGGG
CCATTATTGGCTTGAATGATACCAGTTCAGGGCAAATTCTTTACGATGGTAAAGTAATTAATGGTAGAAAATCTAAATCA
GAAGCCAATGAACTTATACGTAAAATTCAAATGATTTTCCAAGATCCTGCTGCTAGTTTAAATGAACGTGCAACTGTTGA
TTATATCATTTCGGAAGGTCTCTATAACTTTAATCTGTTTAAAACAGAGGAAGAACGTAAAGAAAAAATTAAGACGATGA
TGGCTGAAGTTGGCCTGCTGTCAGAGCATCTGACTCGCTACCCACATGAATTTTCGGGAGGTCAACGCCAGCGGATTGGT
ATTGCCAGAGCCTTAGTGATGAATCCTGAATTCGTTATTGCTGATGAGCCTATCTCAGCTTTAGATGTCTCTGTTCGAGC
ACAAGTCCTAAATCTTCTTAAAAGAATGCAGGCAGAAAAAGGGCTCACTTATCTTTTCATCGCCCATGACCTTTCCGTTG
TTCGATTCATTTCAGATCGTATTGCGGTTATTCACAAAGGAGTTATTGTGGAGGTTGCAGAAACAGAAGAATTATTTAAT
AATCCTATCCATCCTTACACAAAATCTCTGCTGTCAGCCGTTCCTATTCCTGATCCGATTTTAGAACGTCAAAAAGAACT
TGTTGTTTATAATCCAGATCAGCATGATTATACCGTAGATAAGCCATCAATGGTTGAAATCAAACCAAATCACTTTGTTT
GGGCAAACCAAGCAGAAATTAAAAAGTATCAAAAAGAATTGTAA

Domains

Predicted by InterproScan.

• ABC transporter (ABC_tran) (25-178)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (230-262)

3D structure

• AlphaFold DB: A0A3P5XSN6

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiF	Streptococcus thermophilus LMG 18311	82.68	99.674	0.824
amiF	Streptococcus thermophilus LMD-9	82.353	99.674	0.821
amiF	Streptococcus salivarius strain HSISS4	82.353	99.674	0.821