Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | LG36_RS01855 | Genome accession | NZ_CP009472 |
| Coordinates | 361655..362251 (+) | Length | 198 a.a. |
| NCBI ID | WP_038599083.1 | Uniprot ID | - |
| Organism | Lactococcus lactis strain AI06 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 356655..367251
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LG36_RS01840 (LG36_0340) | ahpC | 357027..357590 (+) | 564 | WP_003131651.1 | alkyl hydroperoxide reductase subunit C | - |
| LG36_RS01845 (LG36_0341) | ahpF | 357656..359185 (+) | 1530 | WP_038602675.1 | alkyl hydroperoxide reductase subunit F | - |
| LG36_RS01850 (LG36_0342) | - | 359351..361516 (+) | 2166 | WP_038599080.1 | penicillin-binding transpeptidase domain-containing protein | - |
| LG36_RS01855 (LG36_0343) | recR | 361655..362251 (+) | 597 | WP_038599083.1 | recombination mediator RecR | Machinery gene |
| LG36_RS01860 (LG36_0344) | - | 362368..363417 (+) | 1050 | WP_038599086.1 | D-alanine--D-alanine ligase | - |
| LG36_RS01865 (LG36_0345) | murF | 363492..364814 (+) | 1323 | WP_038599090.1 | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase | - |
| LG36_RS01870 (LG36_0346) | - | 364984..366636 (+) | 1653 | WP_038599093.1 | peptide ABC transporter substrate-binding protein | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21939.24 Da Isoelectric Point: 4.8226
>NTDB_id=112702 LG36_RS01855 WP_038599083.1 361655..362251(+) (recR) [Lactococcus lactis strain AI06]
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTESDPCTICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI
MYYPEPIARLIESFSKLPGIGQKTATRLAFYTIGMEDQDVNEFAKNLLSAKRDLSFCSICGNLTESDPCTICTDPTRDRT
TILVVEESKDVLAMEKIREYRGLYHVLHGTISPMNGISPDEINVKTLITRLMDSEVKEVIIATNATSDGEATAMYLARMI
KPAGIKVTRLARGLAVGSDIEYADEITLSKAVENRLEI
Nucleotide
Download Length: 597 bp
>NTDB_id=112702 LG36_RS01855 WP_038599083.1 361655..362251(+) (recR) [Lactococcus lactis strain AI06]
ATGTATTATCCTGAACCTATTGCTCGCCTGATTGAGTCGTTCTCAAAATTACCAGGGATTGGTCAAAAAACAGCGACTCG
ATTGGCTTTTTATACGATTGGCATGGAAGATCAAGATGTCAATGAATTTGCAAAAAATCTTCTGTCAGCAAAACGGGATT
TGAGTTTTTGCTCGATTTGCGGGAATTTAACAGAAAGTGATCCTTGTACCATTTGTACCGATCCAACGCGTGATCGAACA
ACTATATTGGTCGTTGAAGAATCTAAAGATGTTCTTGCTATGGAAAAAATCCGGGAATATCGAGGACTTTATCATGTTTT
GCATGGTACGATTAGTCCAATGAATGGAATTTCTCCTGATGAAATTAATGTTAAAACATTGATTACAAGATTAATGGATT
CAGAGGTTAAAGAAGTGATTATCGCAACTAATGCCACTTCTGACGGAGAAGCAACCGCCATGTATCTGGCTCGAATGATT
AAGCCTGCAGGAATTAAAGTCACTCGCTTGGCTCGTGGATTAGCTGTAGGGTCTGATATAGAATACGCAGATGAAATTAC
TTTATCAAAAGCAGTAGAGAATCGGTTGGAAATTTGA
ATGTATTATCCTGAACCTATTGCTCGCCTGATTGAGTCGTTCTCAAAATTACCAGGGATTGGTCAAAAAACAGCGACTCG
ATTGGCTTTTTATACGATTGGCATGGAAGATCAAGATGTCAATGAATTTGCAAAAAATCTTCTGTCAGCAAAACGGGATT
TGAGTTTTTGCTCGATTTGCGGGAATTTAACAGAAAGTGATCCTTGTACCATTTGTACCGATCCAACGCGTGATCGAACA
ACTATATTGGTCGTTGAAGAATCTAAAGATGTTCTTGCTATGGAAAAAATCCGGGAATATCGAGGACTTTATCATGTTTT
GCATGGTACGATTAGTCCAATGAATGGAATTTCTCCTGATGAAATTAATGTTAAAACATTGATTACAAGATTAATGGATT
CAGAGGTTAAAGAAGTGATTATCGCAACTAATGCCACTTCTGACGGAGAAGCAACCGCCATGTATCTGGCTCGAATGATT
AAGCCTGCAGGAATTAAAGTCACTCGCTTGGCTCGTGGATTAGCTGTAGGGTCTGATATAGAATACGCAGATGAAATTAC
TTTATCAAAAGCAGTAGAGAATCGGTTGGAAATTTGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Streptococcus pneumoniae R6 |
78.283 |
100 |
0.783 |
| recR | Bacillus subtilis subsp. subtilis str. 168 |
59.596 |
100 |
0.596 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
49.231 |
98.485 |
0.485 |