Detailed information NTG0112702

Bioinformatically predicted

Overview

• Name: pilS
• Type: Regulator
• Locus tag: PSYRMG_RS19670
• Genome accession: NZ_CP005970
• Coordinates: 4508392..4509984 (-)
• Length: 530 a.a.
• NCBI ID: WP_060708650.1
• Uniprot ID: A0A1H0LTJ9
• Organism: Pseudomonas syringae UMAF0158
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 4503392..4514984

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PSYRMG_RS19655 (PSYRMG_19990)	-	4505395..4505793 (+)	399	WP_003371127.1	type IV pilin protein	-
PSYRMG_RS19660 (PSYRMG_19995)	thiO	4505819..4506922 (+)	1104	WP_003371129.1	glycine oxidase ThiO	-
PSYRMG_RS19665 (PSYRMG_20000)	pilR	4507052..4508389 (-)	1338	WP_044310107.1	sigma-54 dependent transcriptional regulator	Regulator
PSYRMG_RS19670 (PSYRMG_20005)	pilS	4508392..4509984 (-)	1593	WP_060708650.1	ATP-binding protein	Regulator
PSYRMG_RS19675 (PSYRMG_20010)	-	4509974..4510213 (-)	240	WP_032609810.1	PP0621 family protein	-
PSYRMG_RS19680 (PSYRMG_20015)	-	4510334..4511356 (-)	1023	WP_003371138.1	outer membrane protein assembly factor BamD	-
PSYRMG_RS19685 (PSYRMG_20020)	rluD	4511506..4512468 (+)	963	WP_002551999.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
PSYRMG_RS19690 (PSYRMG_20025)	pgeF	4512465..4513193 (+)	729	WP_060708651.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 530 a.a.
• Molecular weight: 58007.93 Da
• Isoelectric Point: 7.0012

>NTDB_id=112702 PSYRMG_RS19670 WP_060708650.1 4508392..4509984(-) (pilS) [Pseudomonas syringae UMAF0158]
MTADSPSLVSPQAQRILRLYHLYRLTIGVVLVLLISSSLETELLQLANPNLFRSGCWLYLVFNILVVVLLERPSRQAQFF
GLAMTDAIMLSALFYAAGGPSSGIGNLLIASVAISNVLLRGRIGLLIAAVSAIGIIYLTFYISFGTPSVSNDYVQAGSLG
ALCFAAALLVQALTARMQVSEVLAEQRAADVDSLEALNALILQRMRTGILVLDANHQVLLANQGALHLLGQEQLVGQLID
TCSPQLVERLRQWLVNPIMVPRSITTAPVGLVLQPSFARLNRGDQRQTLVFLEDLSQIAHQAQQLKLAALGRLTAGIAHE
IRNPLGAVSHAAQLLNESEELSAADRRLGQIIHEQSGRIDRVIENVLQLSRRREAQPELLDLKTWLEHFVAEFRSSAAPN
QSIHVDISPGTLTTRMDSGQLTQIMTNLLQNGLRYSGKNHPSAQVWLKLHNDPRSELPTLEVLDDGPGVSEQHLSKIFEP
FFTTESKGTGLGLYLSRELCESNQAHLEYAPRPTGGSCLRITFAHPFKTS

Nucleotide

• Length: 1593 bp

>NTDB_id=112702 PSYRMG_RS19670 WP_060708650.1 4508392..4509984(-) (pilS) [Pseudomonas syringae UMAF0158]
GTGACCGCTGACTCACCGTCCCTTGTCAGCCCGCAGGCGCAGCGGATTCTGCGGCTGTACCACCTCTATCGACTGACCAT
CGGCGTCGTACTGGTCCTGTTGATTTCCAGCAGCCTGGAAACCGAGCTGCTGCAACTGGCCAACCCGAACCTGTTCCGCT
CGGGCTGCTGGTTGTATCTGGTGTTCAACATTCTGGTCGTCGTGCTGCTGGAACGCCCCAGCCGTCAGGCACAGTTTTTC
GGCCTGGCGATGACAGACGCGATCATGCTCTCCGCGCTGTTCTATGCAGCCGGCGGGCCCTCCAGCGGTATCGGCAACCT
GTTGATTGCCTCGGTAGCGATCAGCAATGTGTTGCTGCGCGGCCGTATCGGCTTGTTGATCGCTGCGGTTTCGGCCATCG
GCATCATCTACCTGACGTTCTACATCAGCTTCGGCACACCCTCGGTTTCCAACGACTACGTGCAGGCTGGCTCGCTGGGC
GCCCTGTGCTTCGCCGCCGCCCTACTGGTGCAGGCGCTGACAGCGCGCATGCAGGTCAGCGAGGTACTGGCCGAGCAGCG
TGCGGCGGATGTCGACAGCCTGGAGGCACTCAACGCACTCATTCTGCAACGCATGCGTACCGGCATTCTGGTGCTGGATG
CCAACCATCAGGTGCTGCTGGCCAATCAGGGGGCCTTGCACCTGCTGGGCCAGGAACAACTGGTCGGCCAGCTCATCGAC
ACCTGCTCGCCACAACTGGTCGAACGCCTGCGCCAGTGGCTCGTCAATCCGATCATGGTGCCGCGCAGCATCACCACCGC
CCCCGTGGGTCTGGTACTGCAACCGAGCTTCGCCAGACTCAACCGTGGCGATCAGCGTCAGACGCTGGTTTTTCTCGAAG
ACCTGTCGCAGATTGCTCATCAGGCGCAGCAGCTCAAGCTTGCCGCACTGGGACGCCTGACCGCCGGGATTGCCCACGAA
ATACGCAACCCGCTGGGTGCCGTCAGTCATGCGGCGCAGTTGCTTAATGAATCGGAAGAGCTCAGTGCAGCGGATCGACG
CCTGGGGCAGATCATTCATGAGCAGTCGGGACGCATTGATCGGGTCATCGAAAATGTCCTGCAATTGTCGCGCAGGCGCG
AAGCACAGCCCGAACTGCTCGACCTGAAAACCTGGCTGGAACACTTTGTTGCTGAATTTCGCAGTTCCGCTGCGCCCAAT
CAGTCGATTCATGTCGACATAAGCCCCGGCACGCTGACAACCCGCATGGATTCTGGACAACTGACGCAAATCATGACCAA
CCTGTTGCAGAACGGCCTGCGCTACAGCGGCAAAAATCATCCATCAGCACAGGTCTGGCTGAAACTGCACAATGACCCCA
GAAGCGAGCTGCCTACGCTGGAAGTGCTGGACGACGGGCCGGGGGTCAGCGAGCAACACCTGAGCAAGATCTTCGAACCG
TTTTTCACCACAGAGAGCAAAGGCACCGGCCTTGGTCTATATCTGTCACGTGAACTGTGCGAAAGCAATCAGGCGCACCT
GGAATATGCGCCCCGCCCCACGGGTGGCAGTTGCCTGCGCATTACCTTCGCCCACCCGTTCAAGACGAGCTGA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (417-523)

• His Kinase A (phospho-acceptor) domain (HisKA) (309-373)

• PAS domain (PAS_8) (202-254)

3D structure

• AlphaFold DB: A0A1H0LTJ9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilS	Pseudomonas aeruginosa PAK	60.829	100	0.609