Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA1   Type   Machinery gene
Locus tag   FGL10_RS09820 Genome accession   NZ_LR590477
Coordinates   1811301..1811996 (+) Length   231 a.a.
NCBI ID   WP_003708186.1    Uniprot ID   D0W896
Organism   Neisseria lactamica strain NCTC10617     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 1806301..1816996
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGL10_RS09800 (NCTC10617_01716) trpC 1807652..1808434 (-) 783 WP_003708179.1 indole-3-glycerol phosphate synthase TrpC -
  FGL10_RS09805 (NCTC10617_01717) - 1808486..1809442 (-) 957 WP_003708182.1 YheT family hydrolase -
  FGL10_RS09810 (NCTC10617_01718) murJ 1809545..1811083 (-) 1539 WP_003708184.1 murein biosynthesis integral membrane protein MurJ -
  FGL10_RS09815 - 1811083..1811274 (-) 192 WP_002215672.1 hypothetical protein -
  FGL10_RS09820 (NCTC10617_01719) dsbA1 1811301..1811996 (+) 696 WP_003708186.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  FGL10_RS09825 (NCTC10617_01720) amgK 1812053..1813057 (-) 1005 WP_003708187.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  FGL10_RS09830 (NCTC10617_01721) - 1813127..1815532 (+) 2406 WP_003708188.1 LPS-assembly protein LptD -
  FGL10_RS09835 (NCTC10617_01722) - 1815629..1816612 (+) 984 WP_004467662.1 peptidylprolyl isomerase -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25175.79 Da        Isoelectric Point: 5.6343

>NTDB_id=1126947 FGL10_RS09820 WP_003708186.1 1811301..1811996(+) (dsbA1) [Neisseria lactamica strain NCTC10617]
MKSRHLALGVAALFALAACDSKVQTSVPADSAPAASAAAPAGLVEGQNYTVLANPIPQQQTGKVEVLEFFGYFCPHCAHL
EPVLSKHAKSFKDDMYLRTEHVVWQKEMLPLARLAAAVDMAAAESKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTAF
DGKKVLAAYESPESQARAGKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=1126947 FGL10_RS09820 WP_003708186.1 1811301..1811996(+) (dsbA1) [Neisseria lactamica strain NCTC10617]
ATGAAATCCAGACACCTCGCCCTCGGCGTTGCCGCCCTGTTCGCCCTTGCCGCGTGCGACAGCAAAGTCCAAACCAGCGT
CCCCGCCGACAGCGCGCCTGCCGCTTCCGCCGCCGCCCCCGCCGGGCTGGTCGAAGGGCAAAACTACACCGTCCTTGCCA
ACCCGATTCCCCAACAGCAGACAGGCAAGGTTGAAGTGCTCGAATTTTTCGGCTACTTCTGTCCGCACTGCGCCCACCTC
GAACCTGTTTTGAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAACACGTCGTCTGGCAGAAAGA
AATGCTGCCGCTGGCACGCCTCGCCGCCGCCGTCGATATGGCTGCCGCCGAAAGCAAAGATGTGGCGAACAGCCATATTT
TCGATGCGATGGTTAATCAGAAAATTAAGCTGCAAGAGCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAAACCGCCTTT
GACGGCAAAAAAGTCCTTGCCGCCTACGAATCTCCCGAAAGCCAGGCGCGTGCCGGCAAAATGCAGGAGCTGACCGAAAC
CTTCCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGCAAATATAAAGTCGAATTTGCCGACTGGGAGTCCGGTATGA
ACACCATCGACCTTTTGGCGGACAAAGTACGCGAAGAACAAAAAGCCGCGCAGTAA

Domains


Predicted by InterproScan.

(62-211)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB D0W896

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

97.414

100

0.978

  dsbA2 Neisseria meningitidis MC58

76.19

81.818

0.623


Multiple sequence alignment