Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   FGK81_RS10080 Genome accession   NZ_LR590466
Coordinates   1818785..1818883 (-) Length   32 a.a.
NCBI ID   WP_020833188.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain NCTC8193     
Function   activate transcription of comX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1813785..1823883
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGK81_RS09440 (NCTC8193_01879) - 1814985..1816760 (-) 1776 WP_011888527.1 acyltransferase family protein -
  FGK81_RS09445 (NCTC8193_01880) - 1816757..1817158 (-) 402 WP_011017240.1 MORN repeat-containing protein -
  FGK81_RS09450 (NCTC8193_01881) - 1817181..1817618 (-) 438 WP_002994668.1 low molecular weight protein-tyrosine-phosphatase -
  FGK81_RS09455 (NCTC8193_01882) ruvB 1817756..1818754 (-) 999 WP_002986679.1 Holliday junction branch migration DNA helicase RuvB -
  FGK81_RS10080 (NCTC8193_01883) comS 1818785..1818883 (-) 99 WP_020833188.1 quorum-sensing system DWW-type pheromone Regulator
  FGK81_RS09460 (NCTC8193_01884) comR 1818974..1819885 (-) 912 WP_011888526.1 helix-turn-helix domain-containing protein Regulator
  FGK81_RS09465 (NCTC8193_01885) purB 1820016..1821308 (-) 1293 WP_011888525.1 adenylosuccinate lyase -
  FGK81_RS09470 (NCTC8193_01886) - 1821328..1822746 (-) 1419 WP_011888524.1 hypothetical protein -
  FGK81_RS09475 (NCTC8193_01887) purK 1822748..1823821 (-) 1074 WP_011888523.1 5-(carboxyamino)imidazole ribonucleotide synthase -

Sequence

Protein


Download         Length: 32 a.a.        Molecular weight: 3758.63 Da        Isoelectric Point: 10.7919

>NTDB_id=1126816 FGK81_RS10080 WP_020833188.1 1818785..1818883(-) (comS) [Streptococcus pyogenes strain NCTC8193]
MLKKVKPFLLLAAVVAFKVARVMHEFDWWNLG

Nucleotide


Download         Length: 99 bp        

>NTDB_id=1126816 FGK81_RS10080 WP_020833188.1 1818785..1818883(-) (comS) [Streptococcus pyogenes strain NCTC8193]
ATGTTAAAAAAAGTTAAGCCATTTTTACTATTAGCCGCAGTAGTTGCATTTAAAGTTGCTCGTGTAATGCATGAATTTGA
TTGGTGGAATCTTGGTTAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Streptococcus pyogenes MGAS315

100

100

1
  comS Streptococcus pyogenes MGAS8232

45.161

96.875

0.437

Multiple sequence alignment