Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptA   Type   Regulator
Locus tag   E0F34_RS02695 Genome accession   NZ_LR536843
Coordinates   494994..495725 (+) Length   243 a.a.
NCBI ID   WP_000889921.1    Uniprot ID   A0AAI8ZWM3
Organism   Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 489994..500725
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E0F34_RS02670 (SAMEA104035599_00509) dnaK 490165..491988 (+) 1824 WP_000034662.1 molecular chaperone DnaK -
  E0F34_RS02675 (SAMEA104035599_00510) - 491990..492346 (+) 357 WP_130885224.1 tRNA (guanine-N7)-methyltransferase -
  E0F34_RS02680 (SAMEA104035599_00511) dnaJ 492748..493884 (+) 1137 WP_001066295.1 molecular chaperone DnaJ -
  E0F34_RS02685 (SAMEA104035599_00512) - 494219..494506 (-) 288 WP_000777760.1 hypothetical protein -
  E0F34_RS02690 (SAMEA104035599_00513) - 494516..494926 (-) 411 WP_001278301.1 HIT family protein -
  E0F34_RS02695 (SAMEA104035599_00514) pptA 494994..495725 (+) 732 WP_000889921.1 ABC transporter ATP-binding protein Regulator
  E0F34_RS02700 (SAMEA104035599_00515) - 495722..496771 (+) 1050 WP_000653773.1 ABC transporter permease -
  E0F34_RS02710 (SAMEA104035599_00516) - 496939..497268 (-) 330 WP_000132567.1 hypothetical protein -
  E0F34_RS02715 (SAMEA104035599_00517) - 497544..497882 (+) 339 WP_000876675.1 LytTR family DNA-binding domain-containing protein -
  E0F34_RS02720 (SAMEA104035599_00518) comE/blpR 497887..498624 (+) 738 WP_001219122.1 response regulator transcription factor Regulator
  E0F34_RS02725 (SAMEA104035599_00519) - 498638..499978 (+) 1341 WP_001099895.1 sensor histidine kinase -
  E0F34_RS02730 (SAMEA104035599_00520) blpC 500023..500178 (-) 156 WP_000358814.1 quorum-sensing system pheromone BlpC -

Sequence


Protein


Download         Length: 243 a.a.        Molecular weight: 26998.46 Da        Isoelectric Point: 4.7792

>NTDB_id=1126540 E0F34_RS02695 WP_000889921.1 494994..495725(+) (pptA) [Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8]
MLEIKNLTGGYVHVPVLKDVSFTVESGQLVGLIGLNGAGKSTTINEIIGLLAPYSGSININGLTLQGDATSYRKQIGYIP
ETPSLYEELTLREHIETVAMAYGIEQKVAFERVEPLLKMFRLEQKLDWFPVHFSKGMKQKVMIICAFVADPSLFIVDEPF
LGLDPLAISDLIQLLEVEKQKGKSILMSTHVLDSAEKMCDAFVILHKGEVRAKGNLLQLREAFDMPEASLNDIYLALTKE
EDL

Nucleotide


Download         Length: 732 bp        

>NTDB_id=1126540 E0F34_RS02695 WP_000889921.1 494994..495725(+) (pptA) [Streptococcus pneumoniae strain GPSC55 substr. ST3774 isolate b04a6400-1f66-11e7-b93e-3c4a9275d6c8]
ATGTTAGAAATTAAAAACCTGACAGGTGGCTATGTTCATGTTCCTGTTTTGAAAGATGTGTCCTTTACTGTTGAAAGTGG
GCAGTTGGTCGGTTTGATTGGTCTCAATGGTGCTGGGAAATCAACGACGATCAATGAGATTATCGGTCTGTTGGCACCTT
ATAGTGGCTCCATCAATATCAATGGCCTGACTCTGCAAGGAGATGCGACTAGCTACCGCAAGCAGATTGGCTACATTCCT
GAGACGCCTAGTCTGTATGAGGAATTGACCCTCAGAGAGCATATCGAAACGGTTGCTATGGCTTACGGTATTGAGCAAAA
AGTGGCTTTCGAACGAGTAGAGCCCTTGTTAAAAATGTTCCGTTTGGAACAGAAATTAGACTGGTTCCCTGTTCATTTTT
CAAAAGGGATGAAGCAGAAGGTCATGATTATCTGTGCTTTTGTGGCGGATCCAAGTCTTTTCATCGTGGATGAGCCTTTC
CTTGGTCTTGATCCGCTGGCTATTTCTGATTTGATTCAGCTTTTGGAAGTGGAGAAGCAAAAGGGCAAGTCTATTCTCAT
GAGTACCCACGTGCTGGATTCGGCGGAGAAGATGTGTGATGCCTTTGTCATTCTTCACAAGGGAGAGGTGCGTGCCAAAG
GCAATCTCCTGCAACTACGCGAAGCCTTTGATATGCCTGAGGCTAGTTTGAATGATATTTACTTGGCTCTGACAAAAGAG
GAGGACCTATGA

Domains


Predicted by InterproScan.

(17-160)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

71.784

99.177

0.712

  pptA Streptococcus thermophilus LMD-9

70.954

99.177

0.704


Multiple sequence alignment