Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   OU5_RS19280 Genome accession   NZ_CP005960
Coordinates   4343425..4343829 (+) Length   134 a.a.
NCBI ID   WP_010466861.1    Uniprot ID   -
Organism   Pseudomonas mandelii JR-1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 4338425..4348829
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OU5_RS19255 (OU5_3856) pyrR 4339403..4339906 (-) 504 WP_010466851.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  OU5_RS19260 (OU5_3857) ruvX 4339987..4340424 (-) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  OU5_RS19265 (OU5_3858) - 4340424..4340996 (-) 573 WP_010466856.1 YqgE/AlgH family protein -
  OU5_RS19270 (OU5_3859) - 4341212..4342111 (-) 900 WP_010466858.1 energy transducer TonB -
  OU5_RS19275 (OU5_3860) gshB 4342218..4343189 (-) 972 WP_010466860.1 glutathione synthase -
  OU5_RS19280 (OU5_3862) pilG 4343425..4343829 (+) 405 WP_010466861.1 twitching motility response regulator PilG Regulator
  OU5_RS19285 (OU5_3863) pilH 4343887..4344252 (+) 366 WP_008068134.1 twitching motility response regulator PilH -
  OU5_RS19290 (OU5_3864) - 4344263..4344802 (+) 540 WP_010466863.1 chemotaxis protein CheW -
  OU5_RS19295 (OU5_3865) - 4344950..4347007 (+) 2058 WP_010466865.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14613.03 Da        Isoelectric Point: 7.3230

>NTDB_id=112642 OU5_RS19280 WP_010466861.1 4343425..4343829(+) (pilG) [Pseudomonas mandelii JR-1]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNHSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=112642 OU5_RS19280 WP_010466861.1 4343425..4343829(+) (pilG) [Pseudomonas mandelii JR-1]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGACGATTCGAAGACGATTCGTCGTACCGCCGAAACGCTGTT
GAAAAACGTGGGTTGTGAAGTCATCACGGCCATCGATGGTTTCGATGCCCTGGCCAAGATTGCCGATAACCATCCCGGCA
TCATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCGTTGATCAAGAACCACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATCCAGGCCCATGTACCGGGCTTCGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709

Multiple sequence alignment