Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   E0F40_RS01275 Genome accession   NZ_LR216065
Coordinates   215853..217112 (+) Length   419 a.a.
NCBI ID   WP_000900660.1    Uniprot ID   A0A064C2H0
Organism   Streptococcus pneumoniae strain GPSC18 substr. ST13 isolate 55896440-41bd-11e5-998e-3c4a9275d6c6     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 210853..222112
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E0F40_RS01245 (SAMEA3714487_00228) - 211022..211438 (+) 417 WP_000628392.1 GNAT family N-acetyltransferase -
  E0F40_RS01250 - 212253..212345 (-) 93 WP_000970381.1 type I toxin-antitoxin system Fst family toxin -
  E0F40_RS01255 (SAMEA3714487_00229) ruvB 212479..213477 (+) 999 WP_001813535.1 Holliday junction branch migration DNA helicase RuvB -
  E0F40_RS01260 (SAMEA3714487_00230) - 213458..214030 (+) 573 WP_001815451.1 nucleotidyltransferase family protein -
  E0F40_RS01265 (SAMEA3714487_00231) - 214261..215019 (+) 759 WP_000466720.1 isoprenyl transferase -
  E0F40_RS01270 (SAMEA3714487_00232) - 215028..215831 (+) 804 WP_000189864.1 phosphatidate cytidylyltransferase -
  E0F40_RS01275 (SAMEA3714487_00233) eeP 215853..217112 (+) 1260 WP_000900660.1 RIP metalloprotease RseP Regulator
  E0F40_RS01280 (SAMEA3714487_00234) - 217125..218978 (+) 1854 WP_000814060.1 proline--tRNA ligase -
  E0F40_RS01285 (SAMEA3714487_00235) bglA 219077..220456 (+) 1380 WP_000943510.1 6-phospho-beta-glucosidase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45864.56 Da        Isoelectric Point: 5.9912

>NTDB_id=1126320 E0F40_RS01275 WP_000900660.1 215853..217112(+) (eeP) [Streptococcus pneumoniae strain GPSC18 substr. ST13 isolate 55896440-41bd-11e5-998e-3c4a9275d6c6]
MLGILTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGDDTTEIKT
GTPVSLTLADDGKVKRINLSGKKLDQTALPMQVTQFDFEDKLFIKGLVLEEEKTFAVDHDATVVEADGTEVRIAPLDVQY
QNATIWGKLITNFAGPMNNFILGVVVFWVLIFMQGGVRDVDTNQFHIMPQGALAKVGVPETAQITKIGSHEVSNWESLIQ
AVETETKDKTAPTLDVTISEKGSDKQVTVTPEDSQGRYLLGVQPGVKSDFLSMFVGGFTTAADSALRILSALKNLIFQPD
LNKLGGPVAIFKASSDAAKNGIENILYFLAMISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTLAGVVI
MVVLMIAVTWNDIMRLFFR

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1126320 E0F40_RS01275 WP_000900660.1 215853..217112(+) (eeP) [Streptococcus pneumoniae strain GPSC18 substr. ST13 isolate 55896440-41bd-11e5-998e-3c4a9275d6c6]
ATGCTCGGAATTTTAACCTTTATTCTGGTTTTCGGGATTATTGTAGTGGTGCACGAGTTCGGGCACTTCTACTTTGCCAA
GAAATCAGGGATTTTAGTACGTGAATTTGCCATCGGTATGGGACCTAAAATTTTTGCTCACATTGGCAAGGATGGAACGG
CCTATACCATTCGAATCTTGCCTCTGGGTGGCTATGTCCGCATGGCCGGTTGGGGTGATGATACAACTGAAATCAAGACA
GGAACGCCTGTTAGTTTGACACTTGCTGATGATGGTAAGGTTAAACGCATCAATCTCTCAGGTAAAAAATTGGATCAAAC
AGCCCTCCCTATGCAGGTGACCCAGTTTGATTTTGAAGACAAGCTCTTTATCAAAGGATTGGTTCTGGAAGAAGAAAAAA
CATTTGCAGTGGATCACGATGCAACGGTTGTGGAAGCAGATGGTACTGAGGTTCGGATTGCACCTTTAGATGTTCAATAT
CAAAATGCGACTATCTGGGGCAAACTGATTACCAATTTTGCAGGTCCTATGAACAATTTTATCTTAGGTGTCGTTGTTTT
TTGGGTTTTAATCTTTATGCAGGGTGGTGTCAGAGATGTTGATACCAATCAGTTCCATATCATGCCCCAAGGTGCCTTGG
CCAAGGTAGGAGTACCAGAAACGGCACAAATTACCAAGATTGGCTCACATGAGGTTAGCAACTGGGAAAGCTTGATCCAA
GCTGTGGAAACAGAAACCAAAGATAAGACGGCACCGACTTTGGATGTGACTATTTCTGAAAAGGGGAGTGACAAACAAGT
CACTGTTACACCCGAAGATAGTCAAGGTCGTTACCTTCTAGGTGTTCAACCGGGGGTTAAGTCAGATTTTCTATCCATGT
TTGTAGGTGGTTTTACAACTGCTGCTGACTCAGCTCTCCGAATTCTCTCAGCTCTGAAAAATCTGATTTTCCAACCGGAT
TTGAACAAGTTGGGTGGACCTGTTGCTATCTTTAAGGCAAGTAGTGATGCTGCTAAAAATGGAATTGAAAATATCTTGTA
CTTCTTGGCAATGATTTCCATCAATATTGGGATTTTTAATCTTATTCCGATTCCAGCCTTGGATGGTGGTAAGATTGTGC
TCAATATCCTAGAAGCCATCCGCCGCAAACCATTGAAACAAGAAATTGAAACCTATGTCACCTTGGCCGGAGTGGTCATC
ATGGTTGTCTTGATGATTGCTGTGACTTGGAATGACATTATGCGACTCTTTTTTAGATAA

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A064C2H0

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

63.81

100

0.64

  eeP Streptococcus thermophilus LMG 18311

63.81

100

0.64


Multiple sequence alignment