Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   E0F39_RS01465 Genome accession   NZ_LR216060
Coordinates   247080..248339 (+) Length   419 a.a.
NCBI ID   WP_001865066.1    Uniprot ID   A0A0T8CCL6
Organism   Streptococcus pneumoniae strain GPSC47 substr. ST315     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 242080..253339
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  E0F39_RS01435 (SAMEA3713867_00269) - 242249..242665 (+) 417 WP_000628384.1 GNAT family N-acetyltransferase -
  E0F39_RS01440 - 243480..243572 (-) 93 WP_000970381.1 type I toxin-antitoxin system Fst family toxin -
  E0F39_RS01445 (SAMEA3713867_00270) ruvB 243706..244704 (+) 999 WP_001809468.1 Holliday junction branch migration DNA helicase RuvB -
  E0F39_RS01450 (SAMEA3713867_00271) - 244685..245257 (+) 573 WP_041171033.1 nucleotidyltransferase family protein -
  E0F39_RS01455 (SAMEA3713867_00272) - 245488..246246 (+) 759 WP_000466719.1 isoprenyl transferase -
  E0F39_RS01460 (SAMEA3713867_00273) - 246255..247058 (+) 804 WP_001865067.1 phosphatidate cytidylyltransferase -
  E0F39_RS01465 (SAMEA3713867_00274) eeP 247080..248339 (+) 1260 WP_001865066.1 RIP metalloprotease RseP Regulator
  E0F39_RS01470 (SAMEA3713867_00275) - 248352..250205 (+) 1854 WP_001865065.1 proline--tRNA ligase -
  E0F39_RS01475 (SAMEA3713867_00276) bglA 250305..251684 (+) 1380 WP_000943525.1 6-phospho-beta-glucosidase -

Sequence


Protein


Download         Length: 419 a.a.        Molecular weight: 45863.58 Da        Isoelectric Point: 6.2578

>NTDB_id=1126169 E0F39_RS01465 WP_001865066.1 247080..248339(+) (eeP) [Streptococcus pneumoniae strain GPSC47 substr. ST315]
MLGILTFILVFGIIVVVHEFGHFYFAKKSGILVREFAIGMGPKIFAHIGKDGTAYTIRILPLGGYVRMAGWGDDTTEIKT
GTPVSLTLADDGKVKRINLSGKKLNQTALPMQVTQFDFEDKLFIKGLVLEEEKTFAVDHDATVVEADGTEVRIAPLDVQY
QNATIWGKLITNFAGPMNNFILGVVVFWVLIFMQGGVRDVDTNQFHIMPQGALAKVGVPETAQITKIGSHEVSNWESLIQ
AVETETKDKTAPTLDVTISEKGSDKQVTVTPEDSQGRYLLGVQPGVKSDFLSMFVGGFTTAADSALRILSALKNLIFQPD
LNKLGGPVAIFKASSDAAKNGIENILYFLAMISINIGIFNLIPIPALDGGKIVLNILEAIRRKPLKQEIETYVTLAGVVI
MVVLMIAVTWNDIMRLFFR

Nucleotide


Download         Length: 1260 bp        

>NTDB_id=1126169 E0F39_RS01465 WP_001865066.1 247080..248339(+) (eeP) [Streptococcus pneumoniae strain GPSC47 substr. ST315]
ATGCTCGGAATTTTAACCTTTATTCTGGTTTTTGGGATTATTGTAGTGGTGCACGAGTTCGGGCACTTCTACTTTGCCAA
GAAATCAGGGATTTTAGTACGTGAATTTGCCATCGGTATGGGACCTAAAATCTTTGCTCACATTGGCAAGGATGGAACGG
CCTATACCATTCGAATCTTGCCTCTGGGTGGCTATGTCCGCATGGCCGGTTGGGGTGATGATACAACTGAAATCAAGACA
GGAACGCCTGTTAGTTTGACACTTGCTGATGATGGTAAGGTTAAACGCATCAATCTCTCAGGTAAAAAATTGAATCAAAC
AGCCCTCCCTATGCAGGTGACCCAGTTTGATTTTGAAGACAAGCTCTTTATCAAAGGATTGGTTCTGGAAGAAGAAAAAA
CATTTGCAGTGGATCACGATGCAACGGTTGTGGAAGCAGATGGTACTGAGGTTCGGATTGCACCTTTAGATGTTCAATAT
CAAAATGCGACTATCTGGGGCAAACTGATTACCAATTTTGCAGGTCCTATGAACAATTTTATCTTAGGTGTCGTTGTTTT
TTGGGTTTTAATCTTTATGCAGGGTGGTGTCAGAGATGTTGATACCAATCAGTTCCATATCATGCCCCAAGGTGCCTTGG
CCAAGGTAGGAGTACCAGAAACGGCACAAATTACCAAGATTGGCTCACATGAGGTTAGCAACTGGGAAAGCTTGATCCAA
GCTGTGGAAACAGAAACCAAAGATAAGACGGCACCGACTTTGGATGTGACTATTTCTGAAAAGGGGAGTGACAAACAAGT
CACTGTTACACCCGAAGATAGTCAAGGTCGTTACCTTCTAGGTGTTCAACCGGGGGTTAAGTCAGATTTTCTATCCATGT
TTGTAGGTGGTTTTACAACTGCTGCTGACTCAGCTCTCCGAATTCTCTCAGCTCTGAAAAATCTGATTTTCCAACCGGAT
TTGAACAAGTTGGGTGGACCTGTTGCTATCTTTAAGGCAAGTAGTGATGCTGCTAAAAATGGAATTGAGAATATCTTGTA
CTTCTTGGCAATGATTTCCATCAATATTGGGATTTTTAATCTTATTCCGATTCCAGCCTTGGATGGTGGTAAGATTGTGC
TCAATATCCTAGAAGCCATCCGCCGCAAACCATTGAAACAAGAAATTGAAACCTATGTCACCTTGGCCGGAGTGGTCATC
ATGGTTGTCTTGATGATTGCTGTGACTTGGAATGACATTATGCGACTCTTTTTTAGATAA

Domains


Predicted by InterproScan.

(6-404)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0T8CCL6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

63.571

100

0.637

  eeP Streptococcus thermophilus LMG 18311

63.571

100

0.637


Multiple sequence alignment