Detailed information    

insolico Bioinformatically predicted

Overview

Name   eeP   Type   Regulator
Locus tag   EQB50_RS05555 Genome accession   NZ_LR135435
Coordinates   1072892..1074160 (+) Length   422 a.a.
NCBI ID   WP_002323189.1    Uniprot ID   -
Organism   Enterococcus faecium isolate E8691     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1067892..1079160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EQB50_RS05530 pyrH 1068580..1069302 (+) 723 WP_002293877.1 UMP kinase -
  EQB50_RS05535 frr 1069305..1069862 (+) 558 WP_002293875.1 ribosome recycling factor -
  EQB50_RS05540 - 1070028..1070987 (+) 960 WP_002301399.1 IS30 family transposase -
  EQB50_RS05545 - 1071122..1071934 (+) 813 WP_002294134.1 isoprenyl transferase -
  EQB50_RS05550 - 1071931..1072731 (+) 801 WP_002296531.1 phosphatidate cytidylyltransferase -
  EQB50_RS05555 eeP 1072892..1074160 (+) 1269 WP_002323189.1 RIP metalloprotease RseP Regulator
  EQB50_RS05560 - 1074228..1075937 (+) 1710 WP_002319368.1 proline--tRNA ligase -

Sequence

Protein


Download         Length: 422 a.a.        Molecular weight: 46089.55 Da        Isoelectric Point: 4.9189

>NTDB_id=1125550 EQB50_RS05555 WP_002323189.1 1072892..1074160(+) (eeP) [Enterococcus faecium isolate E8691]
MKTILTFIIVFGILVIVHEFGHFFFAKRSGILVREFAIGMGPKIYGHQAKDGTTYTLRLLPIGGYVRMAGNGDDETEMAP
GMPLSLLLNSDGIVEKINLSKKIQLTNAIPMELSRYDLEDELTITGYVNGDETEVVTYPVDHDATIIENDGTEIRIAPKD
VQFQSAKLWQRMLTNFAGPMNNFILAILLFIILAFMQGGVQVTNTNRVGEIMPNGAAAEAGLKENDEVVSVDGKEIHSWN
DLTTVITKNPGKTLDFKIEREGQVQSVNVTPKSVESNGEKVGQLGIKAPMNTGFMDKIIGGTRQAFSGSLEIFKALGSLF
TGFSLDKLGGPVMMYQLSSEAANQGVTTVISLMALLSMNLGIVNLLPIPALDGGKLVLNIFEGIRGKPLSQEKEGILTLA
GFGFLMLLMVLVTWNDIQRFFF

Nucleotide


Download         Length: 1269 bp        

>NTDB_id=1125550 EQB50_RS05555 WP_002323189.1 1072892..1074160(+) (eeP) [Enterococcus faecium isolate E8691]
ATGAAAACGATTCTGACATTTATCATCGTTTTTGGTATATTAGTGATTGTTCATGAGTTTGGTCATTTCTTCTTTGCGAA
ACGATCAGGAATCCTCGTTCGCGAATTTGCTATCGGTATGGGTCCGAAAATTTATGGGCATCAAGCAAAAGACGGGACAA
CATATACGCTTCGCCTATTACCTATTGGCGGTTATGTTCGAATGGCAGGCAATGGGGATGATGAAACAGAAATGGCACCA
GGAATGCCTCTTTCTCTTTTACTAAATTCTGACGGCATCGTAGAGAAGATAAATTTAAGTAAGAAAATCCAATTGACAAA
TGCTATCCCGATGGAATTGAGCCGTTATGATTTAGAAGATGAGCTGACTATCACTGGTTATGTGAATGGAGACGAAACAG
AAGTAGTAACCTACCCTGTTGATCACGATGCGACGATTATTGAAAACGACGGAACAGAAATCAGAATTGCGCCAAAAGAC
GTACAGTTCCAATCGGCTAAATTGTGGCAGCGTATGCTGACCAACTTTGCTGGACCCATGAATAACTTTATTTTGGCAAT
CCTGTTATTCATCATTCTGGCATTTATGCAAGGTGGTGTTCAAGTGACGAACACTAATCGCGTAGGAGAGATCATGCCTA
ATGGAGCTGCGGCAGAAGCAGGCTTAAAAGAAAATGATGAGGTAGTCAGTGTGGACGGAAAAGAAATCCATTCATGGAAT
GATCTGACAACAGTCATTACGAAAAATCCAGGTAAAACATTAGACTTTAAGATCGAACGAGAAGGTCAGGTGCAATCTGT
CAACGTGACACCGAAATCTGTAGAGTCAAATGGCGAAAAAGTTGGCCAACTTGGTATAAAAGCCCCAATGAATACAGGTT
TTATGGATAAGATCATTGGAGGGACGCGTCAAGCTTTCAGCGGTTCATTGGAAATTTTCAAAGCCTTAGGATCACTATTT
ACAGGTTTCAGTTTAGATAAATTAGGCGGACCTGTCATGATGTACCAATTGTCTTCAGAAGCAGCAAATCAAGGTGTAAC
AACTGTTATTAGTTTGATGGCGCTTCTTTCAATGAATCTCGGAATCGTCAATCTGCTTCCGATTCCTGCCTTAGATGGCG
GGAAATTAGTCTTGAATATTTTTGAAGGGATTCGCGGGAAACCATTAAGTCAAGAAAAAGAAGGAATATTGACATTAGCT
GGCTTTGGATTTTTAATGTTGTTGATGGTGCTAGTTACATGGAACGATATTCAACGATTCTTTTTCTAG

Domains

Predicted by InterproScan.

PDZ domain (PDZ_2)

(199-270)

Peptidase family M50 (Peptidase_M50)

(6-408)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMD-9

54.439

100

0.552
  eeP Streptococcus thermophilus LMG 18311

54.206

100

0.55

Multiple sequence alignment