Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | EL309_RS02295 | Genome accession | NZ_LR134533 |
| Coordinates | 471941..472480 (+) | Length | 179 a.a. |
| NCBI ID | WP_036494688.1 | Uniprot ID | - |
| Organism | Neisseria weaveri strain NCTC12742 | ||
| Function | pseudopilus extrusion and retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 466941..477480
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL309_RS02275 (NCTC12742_00440) | - | 467075..469435 (-) | 2361 | WP_004285029.1 | penicillin-binding protein 1A | - |
| EL309_RS02280 (NCTC12742_00441) | pilM | 469616..470698 (+) | 1083 | WP_004285028.1 | type IV pilus assembly protein PilM | - |
| EL309_RS02285 (NCTC12742_00442) | - | 470700..471281 (+) | 582 | WP_004285027.1 | PilN domain-containing protein | - |
| EL309_RS02290 (NCTC12742_00443) | - | 471284..471919 (+) | 636 | WP_004285026.1 | type 4a pilus biogenesis protein PilO | - |
| EL309_RS02295 (NCTC12742_00444) | pilP | 471941..472480 (+) | 540 | WP_036494688.1 | pilus assembly protein PilP | Machinery gene |
| EL309_RS02300 (NCTC12742_00445) | pilQ | 472502..474670 (+) | 2169 | WP_036494673.1 | type IV pilus secretin PilQ | Machinery gene |
| EL309_RS02305 (NCTC12742_00446) | - | 474733..475266 (+) | 534 | WP_004285023.1 | shikimate kinase | - |
| EL309_RS02310 (NCTC12742_00447) | aroB | 475271..476353 (+) | 1083 | WP_004285022.1 | 3-dehydroquinate synthase | - |
| EL309_RS02315 (NCTC12742_00448) | - | 476461..477219 (-) | 759 | WP_172795974.1 | TatD family hydrolase | - |
Sequence
Protein
Download Length: 179 a.a. Molecular weight: 20035.74 Da Isoelectric Point: 6.2486
>NTDB_id=1124107 EL309_RS02295 WP_036494688.1 471941..472480(+) (pilP) [Neisseria weaveri strain NCTC12742]
MKKILILTGLTLLSACSSEHEDLQEWMQNTQKQARANIKPFEAPSVKPMPPYIPPNQNGLNAFDPKRLNMIHRGANAPNL
NRPKEVLENFSLENLKYVGLLENGKQTSGFIEAENHIYTVAEGNYIGQNFGLIKSITADKILLREVVEDSQGNWVFREAE
LLLSSGETNQDKTTPTGNK
MKKILILTGLTLLSACSSEHEDLQEWMQNTQKQARANIKPFEAPSVKPMPPYIPPNQNGLNAFDPKRLNMIHRGANAPNL
NRPKEVLENFSLENLKYVGLLENGKQTSGFIEAENHIYTVAEGNYIGQNFGLIKSITADKILLREVVEDSQGNWVFREAE
LLLSSGETNQDKTTPTGNK
Nucleotide
Download Length: 540 bp
>NTDB_id=1124107 EL309_RS02295 WP_036494688.1 471941..472480(+) (pilP) [Neisseria weaveri strain NCTC12742]
ATAAAAAAAATACTTATTCTAACGGGTTTAACCCTACTTAGCGCCTGCTCTTCTGAACATGAAGATCTTCAAGAATGGAT
GCAAAATACACAGAAACAAGCTCGTGCAAATATCAAACCGTTCGAAGCGCCATCTGTAAAACCTATGCCGCCTTATATTC
CTCCTAATCAAAATGGTTTAAATGCATTTGACCCTAAACGGTTAAATATGATTCACAGAGGCGCCAACGCTCCAAATTTA
AACCGCCCTAAAGAAGTCTTGGAAAACTTTAGTTTAGAGAATCTAAAATACGTCGGCCTATTGGAAAACGGCAAACAAAC
TTCTGGATTTATTGAAGCTGAAAACCATATTTACACAGTTGCAGAAGGTAACTATATCGGGCAAAATTTTGGGCTTATTA
AAAGTATCACTGCCGATAAAATTTTACTACGTGAAGTAGTGGAAGATAGTCAAGGAAACTGGGTTTTCCGTGAGGCAGAA
CTACTGCTGAGTAGCGGTGAAACAAATCAAGATAAAACAACGCCTACAGGCAATAAATAA
ATAAAAAAAATACTTATTCTAACGGGTTTAACCCTACTTAGCGCCTGCTCTTCTGAACATGAAGATCTTCAAGAATGGAT
GCAAAATACACAGAAACAAGCTCGTGCAAATATCAAACCGTTCGAAGCGCCATCTGTAAAACCTATGCCGCCTTATATTC
CTCCTAATCAAAATGGTTTAAATGCATTTGACCCTAAACGGTTAAATATGATTCACAGAGGCGCCAACGCTCCAAATTTA
AACCGCCCTAAAGAAGTCTTGGAAAACTTTAGTTTAGAGAATCTAAAATACGTCGGCCTATTGGAAAACGGCAAACAAAC
TTCTGGATTTATTGAAGCTGAAAACCATATTTACACAGTTGCAGAAGGTAACTATATCGGGCAAAATTTTGGGCTTATTA
AAAGTATCACTGCCGATAAAATTTTACTACGTGAAGTAGTGGAAGATAGTCAAGGAAACTGGGTTTTCCGTGAGGCAGAA
CTACTGCTGAGTAGCGGTGAAACAAATCAAGATAAAACAACGCCTACAGGCAATAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Neisseria meningitidis MC58 |
52.907 |
96.089 |
0.508 |