Detailed information    

insolico Bioinformatically predicted

Overview


Name   dsbA2   Type   Machinery gene
Locus tag   EL297_RS12830 Genome accession   NZ_LR134525
Coordinates   2174717..2175412 (+) Length   231 a.a.
NCBI ID   WP_002215704.1    Uniprot ID   Q7DDR6
Organism   Neisseria meningitidis strain NCTC10025     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context


Location: 2169717..2180412
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL297_RS12810 (NCTC10025_02166) - 2170340..2170738 (+) 399 WP_002216361.1 DoxX family protein -
  EL297_RS12815 (NCTC10025_02167) - 2170787..2171391 (+) 605 Protein_2132 nitroreductase family protein -
  EL297_RS12820 (NCTC10025_02168) - 2171577..2173689 (+) 2113 Protein_2133 TonB-dependent receptor -
  EL297_RS12825 (NCTC10025_02170) - 2173887..2174546 (+) 660 WP_002218694.1 NYN domain-containing protein -
  EL297_RS12830 (NCTC10025_02171) dsbA2 2174717..2175412 (+) 696 WP_002215704.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  EL297_RS12835 (NCTC10025_02172) ffh 2175743..2177113 (-) 1371 WP_002245848.1 signal recognition particle protein -
  EL297_RS12840 (NCTC10025_02173) - 2177334..2178140 (+) 807 WP_002245849.1 inner membrane protein YpjD -

Sequence


Protein


Download         Length: 231 a.a.        Molecular weight: 25419.90 Da        Isoelectric Point: 5.1502

>NTDB_id=1123951 EL297_RS12830 WP_002215704.1 2174717..2175412(+) (dsbA2) [Neisseria meningitidis strain NCTC10025]
MKLKTLALTSLTLLALAACSKQAETSVPADSAQSSSSAPAAPAELNEGVNYTVLSTPIPQQQAGKIEVLEFFGYFCPHCA
HLEPVLSEHIKTFKDDTYMRREHVVWGDEMKPLARLAAAVEMAGESDKANSHIFDAMVNQKINLADTDTLKKWLSEQTAF
DGKKVLAAFEAPESQARAAQMEELTNKFQISGTPTVIVGGKYQVEFKDWQSGMTTIDQLVDKVREEQKKPQ

Nucleotide


Download         Length: 696 bp        

>NTDB_id=1123951 EL297_RS12830 WP_002215704.1 2174717..2175412(+) (dsbA2) [Neisseria meningitidis strain NCTC10025]
ATGAAACTGAAAACCTTAGCTTTGACTTCATTGACCCTGTTGGCATTGGCCGCTTGTAGCAAACAGGCTGAAACCAGTGT
TCCGGCAGACAGCGCCCAAAGCAGCTCATCTGCTCCGGCAGCCCCTGCTGAGTTGAACGAAGGTGTGAACTACACTGTAT
TGTCTACGCCTATTCCGCAACAGCAGGCCGGTAAAATCGAAGTATTGGAATTTTTCGGCTACTTCTGCCCGCATTGCGCC
CATCTTGAGCCGGTCTTGAGCGAGCACATCAAAACGTTTAAAGACGATACCTATATGCGCCGGGAGCATGTCGTGTGGGG
TGATGAAATGAAACCTTTGGCACGTTTGGCGGCCGCAGTGGAAATGGCCGGTGAATCAGATAAAGCCAACAGCCATATTT
TCGATGCGATGGTTAATCAAAAAATCAATCTGGCCGATACCGATACCCTGAAAAAATGGCTGTCCGAGCAAACAGCGTTT
GACGGCAAAAAAGTATTGGCTGCATTTGAGGCTCCTGAAAGCCAAGCGCGTGCGGCTCAAATGGAAGAGTTGACCAATAA
ATTCCAAATCAGCGGCACACCGACTGTGATTGTCGGCGGCAAATACCAAGTTGAATTTAAAGACTGGCAGTCCGGTATGA
CCACGATTGACCAGTTGGTGGATAAAGTACGCGAAGAGCAGAAAAAGCCGCAATAA

Domains


Predicted by InterproScan.

(65-212)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB Q7DDR6

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA2 Neisseria meningitidis MC58

100

100

1

  dsbA1 Neisseria meningitidis MC58

71.245

100

0.719


Multiple sequence alignment