Detailed information NTG1123881

Bioinformatically predicted

Overview

• Name: pilC
• Type: Machinery gene
• Locus tag: EL310_RS11300
• Genome accession: NZ_LR134522
• Coordinates: 1933441..1936602 (+)
• Length: 1053 a.a.
• NCBI ID: WP_269471742.1
• Uniprot ID: -
• Organism: Neisseria meningitidis strain NCTC3372
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1928441..1941602

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL310_RS11265 (NCTC3372_01917)	msrAB	1928689..1930257 (-)	1569	WP_002233356.1	bifunctional peptide-methionine (S)-S-oxide reductase MsrA/peptide-methionine (R)-S-oxide reductase MsrB	-
EL310_RS11275 (NCTC3372_01918)	pilA	1930402..1931667 (+)	1266	WP_002220091.1	signal recognition particle-docking protein FtsY	Machinery gene
EL310_RS11290 (NCTC3372_01919)	-	1932256..1932540 (+)	285	WP_002246543.1	GIY-YIG nuclease family protein	-
EL310_RS11300 (NCTC3372_01920)	pilC	1933441..1936602 (+)	3162	WP_269471742.1	PilC family type IV pilus tip adhesin	Machinery gene

Sequence

Protein

• Length: 1053 a.a.
• Molecular weight: 115375.12 Da
• Isoelectric Point: 9.6865

>NTDB_id=1123881 EL310_RS11300 WP_269471742.1 1933441..1936602(+) (pilC) [Neisseria meningitidis strain NCTC3372]
MNKTWKRQVFRHTALYTAILMFSHTGGGGASANVSIRSCDERTKAARGKVGQSYNSLPQKSNPRQVNFTTSFSGYKKNTT
FSFNNTDEVVAQKNGVTVFGAATYLPPYGKVSGFDEKRLKERGDVLGWIGTTRPGLVGYSYEGNTCSSGDCPDVSYKTQF
TFGNQGLKSKVNGKLDIYEDKSRDNSPIYKLPDQPWLGVSFNLSSESVVESKKLKKVESSFSEDVTQSNGAQSLYKYKNL
VYTTGDVRNKGNQVHQDKHHAVAFYLNAKLHLLDKKNIQNIAQGITVNFGTLKTRIEPTDAWKNKRHLTHNVGNWEFKDT
GSVSVKLKLPEVKAGRCINKDNPNPKSKAPSPALTAPALWFGPVKDGKAEMYSASVSTYPDSSSSQIFLQNLSRKDDTSK
PGRYSLKPLSTSEIKSKEPSFTGRQTVIRLDGGVRHIQLDRNNEATGLNGNDGKNDTFGIIREGSFMPDASEWKKVLLPW
TVRGFADDSKFKAFNKEENNDNKPKYSQRYRIRENGNNGKRDLGDIVNSPIVAVGEYLATSANDGMVHIFKKNGGSDERS
YNLKLSYIPGTMPRQYFDNDTSALKDSTLAKELRAFAEKGYVGDRYGVDGGFVLREVELSGKKHVFMFGAMGFGGRGAYA
LDLTKAENGDPTAVSLFDVKHDNNGNNSNNSVQLGYTVGTPQIGKTHDGKYAAFLASGYATKTIDDQQNKTALYVYDLEN
NNGTPIAKIEVKDGKGGLSSPTLVDKDLDGTVDIAYAGDRGGNMYRFDLSSDNPSSWTVRTIFQGTKPITSAPAISQLKD
KRVVIFGTGSDLSEEDVDSKEIQHVYGIFDNDTNTGVAKDGQGNGLLEQVLSEENKTLFLTDYKRSDGSGSKGWVVKLKE
GQRVTVKPTVVLRTAFVTIRKYNDGGCGAETAILGINTADGGKLTKKSARPIVPDTNTAVAQYSGHKQTTKGKSIPIGCM
EKDNGIACPNGYVYDKPVNVRYLDEKKTDGFSTTADGDAGGSGTFKEGKKPARNNRCFSGKGVRTLLMNDLDSLDITGPT
CGMKRISWREVFY

Nucleotide

• Length: 3162 bp

>NTDB_id=1123881 EL310_RS11300 WP_269471742.1 1933441..1936602(+) (pilC) [Neisseria meningitidis strain NCTC3372]
ATGAATAAAACTTGGAAACGGCAGGTTTTCCGCCATACCGCGCTTTATACCGCCATATTGATGTTTTCCCATACCGGCGG
GGGGGGCGCAAGCGCAAACGTATCCATACGCTCTTGTGATGAACGGACAAAAGCTGCCCGAGGTAAAGTGGGGCAATCAT
ATAATTCATTGCCGCAAAAAAGCAACCCCCGCCAAGTTAACTTTACGACATCTTTTAGTGGATACAAAAAAAACACTACT
TTCTCATTCAATAATACCGATGAAGTTGTTGCTCAAAAAAACGGTGTTACCGTTTTCGGCGCGGCGACCTACCTGCCGCC
CTACGGCAAGGTTTCCGGTTTTGATGAAAAGAGGCTGAAAGAGCGCGGCGATGTCCTTGGTTGGATTGGTACGACCCGCC
CGGGGTTGGTAGGCTACAGCTACGAAGGTAACACATGCTCCAGCGGAGACTGTCCTGATGTTAGCTATAAAACCCAATTT
ACCTTCGGTAATCAAGGGTTGAAAAGCAAGGTAAACGGCAAGCTGGATATATACGAAGACAAAAGCCGCGACAATTCGCC
CATTTATAAATTGCCGGATCAGCCTTGGTTGGGCGTGTCTTTCAATTTAAGCAGCGAGAGCGTCGTCGAATCAAAGAAAC
TCAAGAAAGTGGAATCTTCTTTTAGCGAGGATGTGACGCAGAGCAATGGTGCGCAAAGCCTATACAAATACAAAAACCTC
GTTTATACGACAGGCGATGTTCGTAATAAGGGTAATCAAGTTCATCAGGACAAACACCACGCTGTCGCCTTTTATCTGAA
CGCCAAGCTGCACTTGCTGGATAAAAAAAACATCCAAAATATCGCGCAAGGCATAACAGTTAATTTTGGTACCTTGAAAA
CACGCATCGAGCCGACGGACGCGTGGAAGAACAAGAGGCATCTCACTCATAATGTTGGTAATTGGGAGTTCAAAGATACC
GGATCAGTCAGCGTCAAACTCAAATTGCCGGAAGTCAAAGCAGGCCGCTGCATCAACAAAGATAACCCCAATCCCAAATC
CAAAGCCCCTTCGCCCGCACTGACTGCCCCCGCGCTGTGGTTCGGACCTGTGAAAGATGGTAAGGCGGAGATGTATTCCG
CTTCGGTTTCTACCTACCCCGACAGTTCGAGCAGCCAAATTTTCCTGCAAAACCTTTCCCGCAAGGATGACACAAGCAAA
CCGGGCCGCTATTCCCTCAAACCCTTGAGTACGTCGGAGATTAAAAGTAAAGAGCCGAGTTTCACGGGGCGGCAAACCGT
CATCCGATTGGATGGCGGCGTACGGCATATCCAACTGGATAGAAACAATGAGGCCACCGGTTTAAATGGAAATGACGGCA
AAAACGACACTTTCGGCATTATTAGAGAAGGGAGCTTCATGCCTGATGCCAGCGAGTGGAAAAAAGTATTGCTGCCTTGG
ACGGTTCGGGGTTTTGCTGATGACAGTAAATTTAAAGCATTCAACAAAGAAGAAAACAACGACAACAAGCCAAAATACAG
CCAAAGATACCGCATCCGCGAAAACGGCAACAACGGCAAGCGCGATTTGGGCGACATCGTCAACAGCCCGATTGTCGCGG
TCGGCGAGTATTTGGCTACTTCCGCCAACGACGGGATGGTGCATATCTTCAAAAAAAACGGCGGCAGTGATGAACGCAGC
TACAATCTGAAGCTCAGCTACATCCCCGGCACGATGCCGCGCCAATATTTTGATAACGACACTTCCGCTCTCAAAGACTC
CACCCTCGCCAAAGAGCTGCGCGCCTTTGCCGAAAAAGGCTATGTGGGCGACCGCTACGGCGTGGACGGCGGCTTTGTCT
TGCGCGAAGTCGAACTGAGCGGGAAAAAACACGTGTTTATGTTCGGCGCGATGGGCTTTGGCGGCAGAGGTGCGTATGCC
TTGGATTTGACCAAAGCCGAAAACGGTGACCCGACCGCCGTTTCCCTGTTTGATGTCAAACATGACAATAATGGCAATAA
TAGCAATAATAGCGTGCAATTAGGCTACACCGTCGGCACGCCGCAAATCGGCAAAACCCACGACGGCAAATACGCCGCTT
TCCTCGCCTCCGGTTATGCGACTAAAACCATTGACGACCAACAAAATAAAACCGCGCTGTATGTGTATGATTTGGAAAAC
AACAACGGTACGCCGATTGCAAAAATCGAAGTGAAGGACGGCAAGGGCGGGCTTTCGTCCCCCACGCTGGTGGATAAAGA
TTTGGACGGCACGGTCGATATCGCCTATGCCGGCGATCGCGGCGGGAATATGTACCGCTTTGATTTGAGCAGCGACAATC
CGTCCAGCTGGACTGTACGCACTATTTTCCAAGGCACGAAGCCGATTACTTCCGCGCCCGCCATTTCCCAACTGAAAGAC
AAACGCGTGGTCATCTTCGGCACGGGCAGTGATTTGAGTGAGGAGGATGTGGACAGCAAAGAAATCCAACACGTTTACGG
TATTTTTGACAATGACACAAACACAGGTGTGGCGAAAGACGGGCAGGGCAACGGGCTGCTCGAGCAAGTGCTTAGTGAGG
AAAATAAAACCTTATTCCTGACCGATTATAAGCGATCCGACGGATCGGGCAGTAAGGGGTGGGTAGTGAAGCTGAAGGAA
GGACAGCGCGTTACCGTCAAACCGACCGTGGTATTGCGTACCGCCTTTGTAACCATCCGCAAATATAACGACGGCGGCTG
CGGCGCGGAAACCGCCATTTTGGGCATCAATACCGCCGACGGCGGCAAGCTGACCAAGAAAAGCGCGCGCCCGATTGTGC
CGGACACCAATACGGCTGTCGCGCAATATTCCGGCCATAAGCAAACCACCAAAGGCAAATCCATCCCTATAGGTTGTATG
GAAAAAGACAATGGAATCGCCTGCCCGAACGGATATGTTTACGACAAACCGGTTAATGTGCGTTATCTGGATGAAAAGAA
AACAGACGGATTTTCAACAACGGCAGACGGCGATGCGGGCGGCAGCGGAACATTCAAAGAGGGTAAAAAACCCGCCCGCA
ATAACCGGTGCTTCTCCGGAAAAGGTGTGCGCACCCTGCTGATGAACGATTTGGACAGCTTGGACATTACCGGCCCGACG
TGCGGTATGAAACGAATCAGCTGGCGTGAAGTCTTCTACTGA

Domains

Predicted by InterproScan.

• Neisseria PilC beta-propeller domain (T4P_PilY1) (523-861)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilC	Neisseria meningitidis A1493	69.504	100	0.706