Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   EL310_RS08745 Genome accession   NZ_LR134522
Coordinates   1499915..1500559 (-) Length   214 a.a.
NCBI ID   WP_002216511.1    Uniprot ID   -
Organism   Neisseria meningitidis strain NCTC3372     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1494915..1505559
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL310_RS08710 (NCTC3372_01476) ftsL 1495284..1495547 (-) 264 WP_002220363.1 cell division protein FtsL -
  EL310_RS08715 (NCTC3372_01477) rsmH 1495544..1496530 (-) 987 WP_002246802.1 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH -
  EL310_RS08720 (NCTC3372_01478) mraZ 1496527..1496982 (-) 456 WP_002222027.1 division/cell wall cluster transcriptional repressor MraZ -
  EL310_RS08725 (NCTC3372_01479) - 1497288..1498478 (+) 1191 WP_164715320.1 class I SAM-dependent methyltransferase -
  EL310_RS08740 (NCTC3372_01482) - 1499061..1499882 (-) 822 WP_002246796.1 undecaprenyl-diphosphate phosphatase -
  EL310_RS08745 (NCTC3372_01483) dsbA1 1499915..1500559 (-) 645 WP_002216511.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  EL310_RS08750 (NCTC3372_01484) ftsN 1500562..1501425 (-) 864 WP_002234558.1 cell division protein FtsN -
  EL310_RS08755 (NCTC3372_01485) comM 1501531..1503027 (-) 1497 WP_002245890.1 YifB family Mg chelatase-like AAA ATPase Machinery gene
  EL310_RS08760 (NCTC3372_01486) - 1503053..1503256 (-) 204 Protein_1466 accessory factor UbiK family protein -
  EL310_RS08770 (NCTC3372_01487) putP 1503738..1505264 (+) 1527 WP_002236704.1 sodium/proline symporter PutP -
  EL310_RS13120 - 1505354..1505521 (-) 168 WP_009346312.1 hypothetical protein -

Sequence

Protein


Download         Length: 214 a.a.        Molecular weight: 23949.97 Da        Isoelectric Point: 9.8294

>NTDB_id=1123868 EL310_RS08745 WP_002216511.1 1499915..1500559(-) (dsbA1) [Neisseria meningitidis strain NCTC3372]
MKLKHLLPLLLSAVLSAQAYALTEGEDYLVLDKPIPQEQSGKIEVLEFFGYFCVHCHHFDPLLLKLGKALPSDAYLRTEH
VVWQPEMLGLARMAAAVNLSGLKYQANPAVFKAVYEQKIRLENRAVAGKWALSQKGFDGKKLMRAYDSPEAAAAALKMQK
LTEQYRIDSTPTVVVGGKYRVIFNNGFDGGVHTIKELVAKVREERKRQPPAVQK

Nucleotide


Download         Length: 645 bp        

>NTDB_id=1123868 EL310_RS08745 WP_002216511.1 1499915..1500559(-) (dsbA1) [Neisseria meningitidis strain NCTC3372]
ATGAAGCTCAAACATCTGTTGCCGCTGCTGCTGTCGGCAGTGTTGTCCGCGCAGGCATATGCCCTGACGGAAGGGGAAGA
CTATCTTGTGTTGGATAAACCCATTCCTCAAGAACAGTCGGGTAAAATTGAGGTTTTGGAATTTTTCGGCTATTTCTGCG
TACATTGCCATCATTTCGATCCTTTGTTATTGAAACTGGGCAAGGCATTGCCGTCTGATGCCTATTTGAGGACGGAGCAC
GTGGTCTGGCAGCCTGAAATGCTCGGTCTGGCCAGGATGGCGGCTGCCGTCAATTTGTCGGGTTTGAAATATCAGGCAAA
CCCTGCCGTGTTTAAAGCAGTTTACGAACAAAAAATCCGCTTGGAAAACAGGGCTGTTGCCGGAAAATGGGCTTTGTCTC
AAAAAGGCTTTGACGGCAAAAAACTGATGCGCGCCTATGATTCCCCCGAAGCTGCCGCCGCCGCATTAAAAATGCAGAAA
CTGACGGAACAATACCGCATCGACAGCACGCCGACCGTTGTCGTCGGCGGAAAATACCGCGTTATCTTCAATAACGGCTT
TGACGGCGGCGTTCATACGATTAAAGAATTGGTTGCCAAAGTCAGGGAAGAACGCAAGCGTCAGCCCCCTGCTGTACAAA
AATAG

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(42-179)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

56.684

87.383

0.495
  dsbA2 Neisseria meningitidis MC58

51.075

86.916

0.444

Multiple sequence alignment