Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   EL267_RS00230 Genome accession   NZ_LR134520
Coordinates   32163..32936 (-) Length   257 a.a.
NCBI ID   WP_000456084.1    Uniprot ID   A0AAD2WW20
Organism   Streptococcus agalactiae strain NCTC13947     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 27163..37936
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL267_RS11205 - 27826..27978 (-) 153 WP_071659936.1 helix-turn-helix domain-containing protein -
  EL267_RS00210 (NCTC13947_00039) - 28145..28342 (-) 198 WP_000285199.1 DUF951 domain-containing protein -
  EL267_RS00215 (NCTC13947_00040) - 28352..29244 (-) 893 Protein_12 diacylglycerol/lipid kinase family protein -
  EL267_RS00220 (NCTC13947_00042) dnaN 29302..30438 (-) 1137 WP_000581132.1 DNA polymerase III subunit beta -
  EL267_RS00225 (NCTC13947_00043) dnaA 30593..31954 (-) 1362 WP_000138202.1 chromosomal replication initiator protein DnaA -
  EL267_RS00230 (NCTC13947_00044) spo0J 32163..32936 (-) 774 WP_000456084.1 ParB/RepB/Spo0J family partition protein Regulator
  EL267_RS00235 (NCTC13947_00045) htrA 33034..34263 (-) 1230 WP_000728357.1 S1C family serine protease Regulator
  EL267_RS00240 (NCTC13947_00046) rlmH 34464..34943 (+) 480 WP_000768335.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -

Sequence

Protein


Download         Length: 257 a.a.        Molecular weight: 29239.71 Da        Isoelectric Point: 9.8145

>NTDB_id=1123792 EL267_RS00230 WP_000456084.1 32163..32936(-) (spo0J) [Streptococcus agalactiae strain NCTC13947]
MEYLETININHIAPNPYQPRLEFNTKELEELADSIKINGLIQPIIVRPSAVFGYELVAGERRLRAAKLAKLESIPAIIKS
YNNDDSMQLAIVENLQRSNLSPIEEAKAYSQLLQKKSMTHEELAKYMGKSRPYISNTIRLLNLPPLITSAIEEGKLSSGH
ARALLSLPDASQQKDWYQRILTEDISVRRLEKLLKQEKKTNHKSLQNKDVFLKHQENELAQFLGSKVKLTINKDGAGNIK
IAFANQEELNRIINTLK

Nucleotide


Download         Length: 774 bp        

>NTDB_id=1123792 EL267_RS00230 WP_000456084.1 32163..32936(-) (spo0J) [Streptococcus agalactiae strain NCTC13947]
ATGGAATATTTAGAAACGATCAACATCAATCATATTGCTCCAAATCCGTATCAACCTCGCCTAGAATTTAATACAAAAGA
ACTAGAAGAATTAGCCGACTCTATTAAAATTAATGGCCTTATTCAACCCATTATTGTAAGACCGTCAGCAGTCTTTGGTT
ACGAACTGGTAGCCGGAGAACGACGGCTAAGAGCCGCAAAGTTAGCTAAATTGGAAAGTATACCTGCAATTATAAAATCC
TATAATAATGATGATAGTATGCAATTAGCTATTGTCGAAAATTTACAACGATCTAATTTGTCACCCATTGAAGAGGCTAA
AGCCTACTCTCAACTTCTACAAAAGAAAAGTATGACACATGAAGAGTTAGCAAAATATATGGGAAAATCTCGTCCCTATA
TATCAAATACGATACGACTACTAAATTTACCGCCACTAATTACTTCAGCTATTGAAGAAGGAAAACTTTCCTCTGGTCAT
GCGCGTGCACTACTCAGTCTACCAGATGCTAGTCAACAGAAAGATTGGTATCAGAGAATCCTCACTGAAGATATTAGTGT
AAGACGACTAGAGAAGTTATTAAAACAAGAAAAGAAAACAAATCATAAGTCACTTCAAAATAAAGATGTCTTTCTAAAAC
ATCAAGAAAATGAGTTAGCTCAATTTCTTGGTAGCAAAGTGAAACTTACTATTAATAAAGATGGTGCTGGCAATATAAAG
ATTGCTTTCGCTAACCAAGAAGAATTAAACAGAATTATCAACACTCTAAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(147-196)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

57.647

99.222

0.572

Multiple sequence alignment