Detailed information    

insolico Bioinformatically predicted

Overview


Name   recX   Type   Regulator
Locus tag   EL276_RS02380 Genome accession   NZ_LR134516
Coordinates   536506..536952 (+) Length   148 a.a.
NCBI ID   WP_107928991.1    Uniprot ID   A0A3S4Y9T7
Organism   Neisseria animaloris strain NCTC12227     
Function   inhibition of RecA (predicted from homology)   
Competence regulation

Genomic Context


Location: 531506..541952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL276_RS02355 (NCTC12227_00483) - 531689..532630 (+) 942 WP_085389493.1 energy transducer TonB -
  EL276_RS10870 (NCTC12227_00484) - 532692..532823 (+) 132 WP_269471273.1 hypothetical protein -
  EL276_RS02360 (NCTC12227_00485) - 532865..533524 (+) 660 WP_085389494.1 MotA/TolQ/ExbB proton channel family protein -
  EL276_RS02365 (NCTC12227_00486) - 533529..533960 (+) 432 WP_085389495.1 ExbD/TolR family protein -
  EL276_RS02370 (NCTC12227_00487) uhpT 534231..535628 (+) 1398 WP_085389496.1 hexose-6-phosphate:phosphate antiporter -
  EL276_RS02375 (NCTC12227_00488) - 535745..536452 (+) 708 WP_085389497.1 phosphoglycolate phosphatase -
  EL276_RS02380 (NCTC12227_00489) recX 536506..536952 (+) 447 WP_107928991.1 recombination regulator RecX Regulator
  EL276_RS02385 (NCTC12227_00490) - 537067..537840 (+) 774 WP_085389499.1 formate/nitrite transporter family protein -
  EL276_RS02390 (NCTC12227_00491) ispF 538094..538573 (+) 480 WP_107878792.1 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase -
  EL276_RS02395 (NCTC12227_00492) rpiA 538659..539324 (+) 666 WP_085389501.1 ribose-5-phosphate isomerase RpiA -
  EL276_RS02400 (NCTC12227_00493) - 539415..540044 (+) 630 WP_126304061.1 thermonuclease family protein -
  EL276_RS02405 (NCTC12227_00494) - 540100..540843 (+) 744 WP_126304063.1 uroporphyrinogen-III synthase -

Sequence


Protein


Download         Length: 148 a.a.        Molecular weight: 17371.82 Da        Isoelectric Point: 10.1434

>NTDB_id=1123715 EL276_RS02380 WP_107928991.1 536506..536952(+) (recX) [Neisseria animaloris strain NCTC12227]
MKPQKSLRTRALDILARQEISRAEFKRKLAPYAESEEELDKLLAEFAERNWQSDERFAEAYIHSKSRMHGRLRLKQALAA
KGVAEETAREFLPNRDSELQTAVAVLRKKFKRPGSDLKETQRQMRFLAYRGFDMDIIRAALKSDWEED

Nucleotide


Download         Length: 447 bp        

>NTDB_id=1123715 EL276_RS02380 WP_107928991.1 536506..536952(+) (recX) [Neisseria animaloris strain NCTC12227]
ATGAAACCGCAAAAATCCCTACGTACCCGCGCCTTAGATATTCTCGCCCGCCAAGAAATCAGCCGTGCCGAATTCAAGCG
CAAGCTCGCGCCTTATGCCGAAAGCGAAGAAGAGTTGGATAAACTGCTGGCGGAGTTTGCCGAACGCAACTGGCAGTCTG
ACGAGCGTTTTGCCGAAGCCTATATTCACAGCAAAAGCAGAATGCATGGCAGGCTGCGTTTGAAACAGGCGTTGGCGGCG
AAAGGCGTGGCCGAAGAAACCGCCCGCGAATTTCTGCCCAATCGCGACAGCGAACTGCAAACCGCCGTTGCCGTGTTGCG
TAAAAAGTTCAAACGGCCCGGCTCGGATTTAAAAGAAACCCAGCGGCAGATGCGTTTTCTGGCTTACCGCGGCTTTGATA
TGGACATTATCCGGGCGGCTTTGAAAAGCGATTGGGAAGAAGACTGA

Domains


Predicted by InterproScan.

(35-143)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A3S4Y9T7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Neisseria gonorrhoeae strain FA1090

68.919

100

0.689


Multiple sequence alignment