Detailed information    

insolico Bioinformatically predicted

Overview


Name   CJE0566   Type   Regulator
Locus tag   EL235_RS04635 Genome accession   NZ_LR134508
Coordinates   894731..895387 (+) Length   218 a.a.
NCBI ID   WP_039626378.1    Uniprot ID   A0A0A8HVY4
Organism   Campylobacter lari strain NCTC11937     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context


Location: 889731..900387
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL235_RS04610 (NCTC11937_00924) - 889834..891354 (-) 1521 WP_114640394.1 inorganic phosphate transporter -
  EL235_RS04615 (NCTC11937_00925) pdxA 891401..892501 (-) 1101 WP_114640395.1 4-hydroxythreonine-4-phosphate dehydrogenase -
  EL235_RS04620 (NCTC11937_00926) - 892498..893265 (-) 768 WP_114640396.1 pyridoxine 5'-phosphate synthase -
  EL235_RS04625 (NCTC11937_00927) - 893321..894280 (+) 960 WP_114640397.1 Ppx/GppA family phosphatase -
  EL235_RS04630 (NCTC11937_00928) - 894291..894734 (+) 444 WP_039626376.1 GatB/YqeY domain-containing protein -
  EL235_RS04635 (NCTC11937_00929) CJE0566 894731..895387 (+) 657 WP_039626378.1 DNA/RNA endonuclease G Regulator
  EL235_RS04640 (NCTC11937_00930) - 895564..899112 (+) 3549 WP_164717493.1 filamentous hemagglutinin N-terminal domain-containing protein -

Sequence


Protein


Download         Length: 218 a.a.        Molecular weight: 26227.18 Da        Isoelectric Point: 9.7797

>NTDB_id=1123534 EL235_RS04635 WP_039626378.1 894731..895387(+) (CJE0566) [Campylobacter lari strain NCTC11937]
MKKFLTLCALALSSFAYTQYELHPSFKEYFKDCSLLMDKYYYINCYDYNYKGTKAIAYKLEAKILNQGHIKKRPRFQDDT
NIPKKYRTYWEDYLRSGYTRGHVVPNQSMNATPQAQLSTFLMSNITPQKKDINAEIWNEIEQRERYLAKKNKELEVLNLV
LYDDKPKRIKNNIAIPSFYVKILKAKNFSECYKVPNNDNFARFDRNYFKEDCRKYIKY

Nucleotide


Download         Length: 657 bp        

>NTDB_id=1123534 EL235_RS04635 WP_039626378.1 894731..895387(+) (CJE0566) [Campylobacter lari strain NCTC11937]
ATGAAAAAATTTCTAACACTTTGTGCTTTAGCTTTAAGCTCTTTTGCTTATACTCAATATGAACTACACCCTAGCTTTAA
AGAGTATTTTAAAGATTGCTCTTTATTGATGGATAAATATTATTATATTAATTGTTATGATTATAATTATAAAGGCACTA
AGGCTATTGCTTATAAATTAGAAGCTAAAATTTTAAATCAAGGACACATCAAAAAACGTCCAAGATTTCAAGATGATACC
AACATACCCAAAAAATACAGAACTTATTGGGAAGATTATCTAAGAAGTGGTTATACAAGAGGGCATGTCGTGCCAAATCA
ATCCATGAATGCAACCCCACAAGCCCAACTTAGCACTTTTCTAATGAGTAACATAACTCCGCAAAAAAAAGATATCAATG
CAGAAATTTGGAATGAAATCGAACAAAGAGAAAGATATTTAGCAAAGAAAAATAAAGAATTAGAAGTCTTAAATTTAGTA
CTTTATGATGATAAGCCAAAACGCATTAAAAACAACATAGCCATTCCTAGTTTTTATGTCAAAATTCTTAAGGCTAAAAA
TTTCAGTGAATGCTATAAAGTGCCAAATAATGATAATTTTGCAAGATTTGATAGAAATTATTTTAAGGAAGATTGTAGAA
AATATATCAAATACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0A8HVY4

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE0566 Campylobacter jejuni RM1221

59.908

99.541

0.596

  CJE1441 Campylobacter jejuni RM1221

63.184

92.202

0.583


Multiple sequence alignment