Detailed information
Bioinformatically predicted
Overview
| Name | ctsR | Type | Machinery gene |
| Locus tag | EL232_RS05620 | Genome accession | NZ_LR134498 |
| Coordinates | 1009089..1009400 (+) | Length | 103 a.a. |
| NCBI ID | WP_002855438.1 | Uniprot ID | A0AA44HLF8 |
| Organism | Campylobacter jejuni strain NCTC13265 | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1004089..1014400
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL232_RS05610 (NCTC13265_01134) | - | 1004771..1005412 (+) | 642 | WP_002867242.1 | HAD family hydrolase | - |
| EL232_RS05615 (NCTC13265_01135) | nifJ | 1005505..1009065 (+) | 3561 | WP_002877436.1 | pyruvate:ferredoxin (flavodoxin) oxidoreductase | - |
| EL232_RS05620 (NCTC13265_01136) | ctsR | 1009089..1009400 (+) | 312 | WP_002855438.1 | hypothetical protein | Machinery gene |
| EL232_RS05625 (NCTC13265_01137) | ctsD | 1009378..1010790 (+) | 1413 | WP_002856543.1 | pilus (MSHA type) biogenesis protein MshL | Machinery gene |
| EL232_RS05630 (NCTC13265_01138) | ctsP | 1010783..1011391 (+) | 609 | WP_002851464.1 | ATP-binding protein | Machinery gene |
| EL232_RS05635 (NCTC13265_01139) | ctsX | 1011395..1011982 (+) | 588 | WP_002867245.1 | hypothetical protein | Machinery gene |
| EL232_RS05640 (NCTC13265_01140) | ctsE | 1011972..1013531 (+) | 1560 | WP_002867246.1 | GspE/PulE family protein | Machinery gene |
Sequence
Protein
Download Length: 103 a.a. Molecular weight: 12475.38 Da Isoelectric Point: 5.8722
>NTDB_id=1123344 EL232_RS05620 WP_002855438.1 1009089..1009400(+) (ctsR) [Campylobacter jejuni strain NCTC13265]
MCFSTLFAQDNFEEYFKLIDKENRINFNTLQNPFVNPTFEKLRHIKITAIMLDKVKIYDRWYKKGDMIDDAIIYEINTKE
IKFQYDNLEIAIQINKNDKININ
MCFSTLFAQDNFEEYFKLIDKENRINFNTLQNPFVNPTFEKLRHIKITAIMLDKVKIYDRWYKKGDMIDDAIIYEINTKE
IKFQYDNLEIAIQINKNDKININ
Nucleotide
Download Length: 312 bp
>NTDB_id=1123344 EL232_RS05620 WP_002855438.1 1009089..1009400(+) (ctsR) [Campylobacter jejuni strain NCTC13265]
TTGTGTTTTAGCACTTTGTTTGCACAAGATAATTTTGAAGAGTATTTTAAACTTATAGATAAAGAAAATCGTATAAATTT
TAATACTCTTCAAAACCCATTTGTGAATCCTACTTTTGAAAAATTAAGACATATTAAAATTACTGCAATTATGCTTGATA
AAGTAAAAATTTATGATCGATGGTATAAAAAAGGTGATATGATTGATGATGCTATAATATATGAAATAAATACTAAAGAG
ATTAAATTCCAATATGATAATTTAGAAATTGCAATCCAAATAAATAAAAATGATAAGATTAATATTAATTAA
TTGTGTTTTAGCACTTTGTTTGCACAAGATAATTTTGAAGAGTATTTTAAACTTATAGATAAAGAAAATCGTATAAATTT
TAATACTCTTCAAAACCCATTTGTGAATCCTACTTTTGAAAAATTAAGACATATTAAAATTACTGCAATTATGCTTGATA
AAGTAAAAATTTATGATCGATGGTATAAAAAAGGTGATATGATTGATGATGCTATAATATATGAAATAAATACTAAAGAG
ATTAAATTCCAATATGATAATTTAGAAATTGCAATCCAAATAAATAAAAATGATAAGATTAATATTAATTAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsR | Campylobacter jejuni subsp. jejuni 81-176 |
100 |
100 |
1 |