Detailed information NTG1123058

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: EL330_RS07455
• Genome accession: NZ_LR134482
• Coordinates: 1592773..1594998 (+)
• Length: 741 a.a.
• NCBI ID: WP_101274847.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain NCTC10475
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1587773..1599998

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL330_RS07425 (NCTC10475_01488)	-	1587919..1588227 (-)	309	WP_101274844.1	phosphodiesterase	-
EL330_RS07430 (NCTC10475_01489)	-	1588231..1588866 (-)	636	WP_101274845.1	PilZ domain-containing protein	-
EL330_RS07435 (NCTC10475_01490)	-	1588903..1590150 (+)	1248	WP_101274846.1	lipoprotein-releasing ABC transporter permease subunit	-
EL330_RS07440 (NCTC10475_01491)	lolD	1590158..1590856 (+)	699	WP_042922568.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
EL330_RS07445 (NCTC10475_01492)	-	1590856..1592100 (+)	1245	WP_003299645.1	lipoprotein-releasing ABC transporter permease subunit	-
EL330_RS07450 (NCTC10475_01493)	-	1592107..1592622 (-)	516	WP_003299644.1	DUF2062 domain-containing protein	-
EL330_RS07455 (NCTC10475_01494)	comA	1592773..1594998 (+)	2226	WP_101274847.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
EL330_RS07460 (NCTC10475_01495)	-	1595070..1595702 (+)	633	WP_031298327.1	MotA/TolQ/ExbB proton channel family protein	-
EL330_RS07465 (NCTC10475_01496)	-	1595699..1596127 (+)	429	WP_014820907.1	ExbD/TolR family protein	-
EL330_RS07470 (NCTC10475_01497)	lpxK	1596127..1597131 (+)	1005	WP_101274848.1	tetraacyldisaccharide 4'-kinase	-
EL330_RS07475 (NCTC10475_01498)	-	1597177..1597362 (+)	186	WP_003299639.1	Trm112 family protein	-
EL330_RS07480 (NCTC10475_01499)	kdsB	1597359..1598123 (+)	765	WP_044316182.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
EL330_RS07485 (NCTC10475_01500)	-	1598125..1598589 (+)	465	WP_101274849.1	low molecular weight protein-tyrosine-phosphatase	-
EL330_RS07490 (NCTC10475_01501)	murB	1598586..1599605 (+)	1020	WP_101274850.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 80934.40 Da
• Isoelectric Point: 9.9822

>NTDB_id=1123058 EL330_RS07455 WP_101274847.1 1592773..1594998(+) (comA) [Stutzerimonas stutzeri strain NCTC10475]
MRTWMLALAAGLVLPRFLPALPSVWILCVLGVLGGLLLSRRRWASSGLLLLGFAWACWQCQSAIDDRLPVSQDGRTYWIQ
GTVSGLPTSTGDVVRFELEDIESRHAGLPSKVRLSWYGGPQVRAGERWRLAARLKRPRGLVNPHAFDYEAWLLARRIGAT
GSVKAGERLFAPHSVNSWRDRLRLRLMEVSASGRQGAIAALVVGDDSGLSREDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALAARWGFWPSRWPWLPCACALALAGALSYGWLAGFDVPVRRACLMVAVVLLWRLRFRHLGVWQPLLLALNGVLLV
DPLVSLQPGFWLSFGAVAVLALAFSGRLGRWKWWATLTRAQWAASLGLLPLLLTLGLPVSASGPLANLIAVPWVSLTVPF
ALLGTLLLPLGAIGETLLWLVGSSLALLFELLSAMATWQPAWLAVGIPIWALLMIGLGVLLMLLPSGVPVRALGLVLLAP
LVYPPYSEVAEGRAQVSVLDVGQGLSVLVRTREHALLYDAGPRQGDFDTGERVVFPSLRSLGVKRLDILLLSHADNDHSG
GAQAIRRLLPVARTVSGEPQRHATDLNAKPCENGAEWRWNGVRFSLWQWQAARESNQTSCVLLVEANGERVLLTGDIDQA
AEQALLLSGKDVKAQWLLLPHHGSRSSSSEPFLRAVEPSAALISRSLHNAFGHPHPTVTARLEASAIDVYDTALHGAIRI
DLGDFSVAEIQRAERRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=1123058 EL330_RS07455 WP_101274847.1 1592773..1594998(+) (comA) [Stutzerimonas stutzeri strain NCTC10475]
ATGCGCACATGGATGTTGGCGCTCGCGGCAGGCCTCGTCTTGCCCCGTTTCTTACCGGCGTTGCCCTCTGTCTGGATCTT
GTGCGTGCTTGGCGTGCTGGGGGGCTTGCTGCTTTCGCGTCGGCGCTGGGCGTCGTCTGGGTTGCTTCTCCTCGGGTTCG
CCTGGGCATGCTGGCAGTGCCAGAGTGCCATTGATGATCGCCTGCCCGTTTCGCAAGATGGCCGGACATACTGGATCCAG
GGGACGGTCAGTGGATTGCCCACCAGCACGGGCGATGTCGTGCGCTTCGAGTTGGAGGATATCGAGTCGAGGCATGCTGG
GCTGCCGTCGAAGGTGCGTCTGTCCTGGTACGGCGGCCCGCAAGTGCGGGCCGGCGAGCGTTGGCGGCTTGCGGCTCGAC
TGAAACGTCCGCGTGGCCTGGTCAATCCGCATGCGTTCGACTACGAAGCCTGGTTGCTGGCGCGTCGCATTGGCGCGACC
GGTTCGGTCAAGGCGGGAGAGCGCCTCTTCGCGCCGCACTCCGTGAATAGTTGGCGCGACCGCTTGAGGCTCCGTCTGAT
GGAGGTCTCCGCGTCCGGTCGACAAGGCGCGATCGCGGCACTGGTGGTCGGTGATGACTCCGGCCTGAGTCGTGAGGATT
GGCAGGTGTTGCAGGACACCGGCACGGTGCACCTGATGGTCATATCGGGACAGCACATCGGCATGCTGGCTGGCTTGCTA
TACGGACTGGTTGCGCTAGCAGCTCGATGGGGCTTCTGGCCCAGCCGTTGGCCCTGGCTTCCATGCGCATGCGCGTTGGC
TCTCGCTGGTGCGCTTTCCTATGGATGGCTCGCGGGGTTCGATGTGCCGGTGCGTCGTGCGTGTCTCATGGTCGCCGTGG
TCCTGCTCTGGCGCTTGCGCTTTCGTCATCTGGGTGTCTGGCAGCCGCTGTTGCTGGCGCTGAATGGTGTCCTGCTGGTC
GATCCCCTGGTCTCGTTGCAGCCGGGGTTTTGGCTCTCATTCGGGGCCGTTGCGGTGCTCGCGCTGGCGTTCTCCGGTCG
GCTCGGCCGATGGAAGTGGTGGGCGACGCTGACGCGCGCCCAATGGGCAGCTTCCCTCGGCCTGCTGCCTCTGTTACTGA
CGCTGGGACTGCCGGTCAGCGCCAGCGGGCCTTTGGCCAATCTGATTGCCGTACCCTGGGTAAGCCTCACCGTTCCCTTC
GCGCTGCTCGGTACGTTGCTTCTGCCGTTGGGCGCTATCGGCGAGACGCTACTCTGGTTGGTCGGCTCCTCGCTGGCGCT
GCTGTTCGAGCTGCTGTCCGCCATGGCTACCTGGCAACCCGCCTGGCTGGCGGTCGGTATACCCATCTGGGCCTTGCTGA
TGATTGGGCTGGGTGTGCTGTTGATGTTATTGCCGTCAGGTGTGCCGGTGCGTGCGCTCGGACTGGTGCTCCTGGCGCCG
TTGGTGTATCCGCCGTATTCCGAAGTAGCCGAAGGACGGGCGCAGGTCTCGGTGCTGGATGTGGGGCAGGGGCTTTCGGT
ACTGGTGCGGACCCGGGAGCACGCGTTGCTCTACGATGCGGGACCGAGACAGGGTGATTTCGATACCGGCGAGCGTGTCG
TGTTCCCGTCGCTGCGAAGCCTGGGCGTGAAGAGGCTGGACATACTGCTGCTGAGCCATGCGGATAACGATCATTCCGGT
GGCGCTCAGGCGATCCGTCGACTGCTTCCGGTCGCGCGGACCGTCAGTGGGGAGCCGCAACGACATGCGACCGATCTAAA
TGCCAAGCCCTGTGAAAACGGTGCCGAGTGGCGGTGGAACGGCGTGCGTTTCAGTCTCTGGCAATGGCAGGCGGCCCGGG
AAAGCAATCAGACGTCATGCGTTCTGCTGGTCGAGGCCAATGGCGAACGGGTGCTGCTTACCGGCGATATCGATCAGGCC
GCGGAGCAGGCGTTGCTGCTCAGCGGAAAGGATGTAAAGGCGCAGTGGTTGCTATTGCCTCATCACGGCAGCCGCAGCTC
ATCGTCGGAACCATTCCTGCGAGCGGTGGAACCGAGCGCCGCGCTGATCTCGCGCAGCCTGCACAACGCTTTCGGTCATC
CTCATCCGACTGTGACCGCTCGCCTCGAAGCGTCCGCAATCGACGTTTACGACACCGCCTTGCACGGCGCGATCCGCATC
GATCTCGGCGATTTCTCGGTGGCGGAGATACAGCGTGCGGAACGTCGGTTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-683)

• Competence protein (Competence) (201-464)

• Domain of unknown function (DUF4131) (DUF4131) (22-168)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	66.574	96.896	0.645
comA	Ralstonia pseudosolanacearum GMI1000	36.494	100	0.379