Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EL330_RS01475 Genome accession   NZ_LR134482
Coordinates   307652..308059 (+) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain NCTC10475     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 302652..313059
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL330_RS01445 (NCTC10475_00290) - 302824..303840 (-) 1017 WP_101275336.1 aspartate carbamoyltransferase catalytic subunit -
  EL330_RS01450 (NCTC10475_00291) pyrR 303888..304400 (-) 513 WP_023446072.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  EL330_RS01455 (NCTC10475_00292) ruvX 304423..304851 (-) 429 WP_003297208.1 Holliday junction resolvase RuvX -
  EL330_RS01460 (NCTC10475_00293) - 304848..305417 (-) 570 WP_044315557.1 YqgE/AlgH family protein -
  EL330_RS01465 (NCTC10475_00294) - 305484..306377 (-) 894 WP_101275335.1 energy transducer TonB -
  EL330_RS01470 (NCTC10475_00295) gshB 306465..307415 (-) 951 WP_101275334.1 glutathione synthase -
  EL330_RS01475 (NCTC10475_00296) pilG 307652..308059 (+) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  EL330_RS01480 (NCTC10475_00297) pilH 308103..308468 (+) 366 WP_003303135.1 twitching motility response regulator PilH -
  EL330_RS01485 (NCTC10475_00298) - 308510..309046 (+) 537 WP_023446068.1 chemotaxis protein CheW -
  EL330_RS01490 (NCTC10475_00299) - 309122..311170 (+) 2049 WP_014818753.1 methyl-accepting chemotaxis protein -
  EL330_RS01495 (NCTC10475_00300) - 311232..312098 (+) 867 WP_101275430.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=1123052 EL330_RS01475 WP_003282729.1 307652..308059(+) (pilG) [Stutzerimonas stutzeri strain NCTC10475]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1123052 EL330_RS01475 WP_003282729.1 307652..308059(+) (pilG) [Stutzerimonas stutzeri strain NCTC10475]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCTGTGGACGGTTTCGATGCGCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGTGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCGGTGATCATGCTGTCTTCCAAAGATGGCCTGTTCGACAAGGCCAAAGGGCGTATTGTCGGATCCGATCAATA
CCTTACCAAGCCGTTCAGCAAAGAAGAGCTGCTCGGTGCGATCAAGGCGCATGTCCCTGATTTCGCACCGGTGGAGCAAG
CATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4

Multiple sequence alignment