Detailed information    

insolico Bioinformatically predicted

Overview

Name   CJE1441   Type   Regulator
Locus tag   EL187_RS04550 Genome accession   NZ_LR134471
Coordinates   859920..860573 (+) Length   217 a.a.
NCBI ID   WP_039650221.1    Uniprot ID   A0A0A8H2G9
Organism   Campylobacter insulaenigrae strain NCTC12927     
Function   repress natural transformation (predicted from homology)   
Competence regulation

Genomic Context

Location: 854920..865573
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL187_RS04525 - 855027..856540 (-) 1514 Protein_871 inorganic phosphate transporter -
  EL187_RS04530 (NCTC12927_00915) pdxA 856587..857687 (-) 1101 WP_039650212.1 4-hydroxythreonine-4-phosphate dehydrogenase -
  EL187_RS04535 (NCTC12927_00916) - 857684..858451 (-) 768 WP_039650214.1 pyridoxine 5'-phosphate synthase -
  EL187_RS04540 (NCTC12927_00917) - 858506..859483 (+) 978 WP_039650216.1 exopolyphosphatase, Ppx/GppA family -
  EL187_RS04545 (NCTC12927_00918) - 859480..859923 (+) 444 WP_039650218.1 GatB/YqeY domain-containing protein -
  EL187_RS04550 (NCTC12927_00919) CJE1441 859920..860573 (+) 654 WP_039650221.1 DNA/RNA endonuclease G Regulator
  EL187_RS04555 (NCTC12927_00920) dnaK 860595..862463 (-) 1869 WP_039650223.1 molecular chaperone DnaK -
  EL187_RS04560 (NCTC12927_00921) grpE 862486..862995 (-) 510 WP_039650225.1 nucleotide exchange factor GrpE -
  EL187_RS04565 (NCTC12927_00922) - 862992..863774 (-) 783 WP_039650227.1 HrcA family transcriptional regulator -
  EL187_RS04570 (NCTC12927_00924) - 864133..864762 (-) 630 WP_039650229.1 hypothetical protein -
  EL187_RS04575 (NCTC12927_00925) - 864759..864923 (-) 165 WP_232012959.1 hypothetical protein -

Sequence

Protein


Download         Length: 217 a.a.        Molecular weight: 26185.09 Da        Isoelectric Point: 9.7266

>NTDB_id=1122903 EL187_RS04550 WP_039650221.1 859920..860573(+) (CJE1441) [Campylobacter insulaenigrae strain NCTC12927]
MKKILGLCALVLNSFAYTQYELHPSFDQYFQNCSLLMNKYYYINCYDYDYKGTKAIAYRLTAEILNRQHIKKRPKFTEDT
NIPKKYRTYWEDYIKSGYTRGHVVPNQSMNTTPQAQFSTFLMSNITPQKKDINNEIWNEIEKRERYLAKKNKELEVLNLI
FYEKNPQRIKNNIAIPSFYVKILKAKTYIECYKVPNDDNFARFNRNYFKEDCSKYIK

Nucleotide


Download         Length: 654 bp        

>NTDB_id=1122903 EL187_RS04550 WP_039650221.1 859920..860573(+) (CJE1441) [Campylobacter insulaenigrae strain NCTC12927]
ATGAAAAAAATATTAGGATTGTGTGCATTAGTATTAAATTCTTTTGCTTATACACAATATGAGCTTCATCCTAGTTTTGA
TCAATATTTTCAAAATTGTTCACTATTGATGAATAAATATTATTATATTAATTGTTATGATTATGATTACAAAGGCACAA
AGGCTATAGCTTATAGGCTAACAGCCGAAATTTTAAATCGACAGCATATTAAAAAACGTCCCAAATTTACAGAAGATACT
AATATACCAAAAAAATATCGGACCTATTGGGAAGATTATATTAAAAGTGGATACACAAGAGGACATGTGGTTCCCAATCA
ATCTATGAATACAACACCCCAAGCTCAATTTAGTACTTTTTTAATGAGTAACATAACTCCTCAAAAAAAAGATATTAATA
ATGAAATTTGGAATGAAATTGAAAAAAGAGAAAGATATCTGGCAAAGAAAAATAAAGAATTAGAGGTTCTAAATTTAATT
TTTTACGAAAAGAATCCTCAGCGTATTAAAAACAATATTGCAATCCCAAGTTTTTACGTAAAAATTTTAAAAGCAAAAAC
ATACATAGAGTGCTATAAAGTACCAAACGATGATAATTTTGCAAGATTTAATAGGAATTATTTTAAGGAAGATTGTTCTA
AGTACATAAAGTAG

Domains

Predicted by InterproScan.

DNA/RNA non-specific endonuclease (Endonuclease_NS)

(36-188)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0A8H2G9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  CJE1441 Campylobacter jejuni RM1221

62.189

92.627

0.576
  CJE0566 Campylobacter jejuni RM1221

56.109

100

0.571

Multiple sequence alignment