Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | EL216_RS05880 | Genome accession | NZ_LR134440 |
| Coordinates | 1269619..1270155 (+) | Length | 178 a.a. |
| NCBI ID | WP_085389157.1 | Uniprot ID | - |
| Organism | Neisseria animaloris strain NCTC12228 | ||
| Function | pseudopilus extrusion and retraction (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1264619..1275155
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL216_RS05860 (NCTC12228_01184) | - | 1264662..1267103 (-) | 2442 | WP_085389558.1 | penicillin-binding protein 1A | - |
| EL216_RS05865 (NCTC12228_01185) | pilM | 1267254..1268351 (+) | 1098 | WP_085389160.1 | type IV pilus assembly protein PilM | - |
| EL216_RS05870 (NCTC12228_01186) | - | 1268353..1268955 (+) | 603 | WP_085389159.1 | PilN domain-containing protein | - |
| EL216_RS05875 (NCTC12228_01187) | - | 1268957..1269601 (+) | 645 | WP_085389158.1 | type 4a pilus biogenesis protein PilO | - |
| EL216_RS05880 (NCTC12228_01188) | pilP | 1269619..1270155 (+) | 537 | WP_085389157.1 | pilus assembly protein PilP | Machinery gene |
| EL216_RS05885 (NCTC12228_01189) | pilQ | 1270173..1272356 (+) | 2184 | WP_085389156.1 | type IV pilus secretin PilQ | Machinery gene |
| EL216_RS05890 (NCTC12228_01190) | - | 1272404..1272934 (+) | 531 | WP_085389155.1 | shikimate kinase | - |
| EL216_RS05895 (NCTC12228_01191) | aroB | 1273318..1274397 (+) | 1080 | WP_085389154.1 | 3-dehydroquinate synthase | - |
Sequence
Protein
Download Length: 178 a.a. Molecular weight: 19731.29 Da Isoelectric Point: 7.4161
>NTDB_id=1122858 EL216_RS05880 WP_085389157.1 1269619..1270155(+) (pilP) [Neisseria animaloris strain NCTC12228]
MKNKILLAGILALAACTPAHEDLKTWTQETQQQAKAKIIPFEEPVINPPKPYTPPAHTGLNAFDNKRLNNAQQGANAPNM
DRPKEVLEGFSLENLKYVGMLKKDNQTSGYVEANGHVYTVHVGNYIGQNFGHIQSIVPDKILLTEVVEDSYGNWTYRKTE
LPLSSGSEKNTATVQNNK
MKNKILLAGILALAACTPAHEDLKTWTQETQQQAKAKIIPFEEPVINPPKPYTPPAHTGLNAFDNKRLNNAQQGANAPNM
DRPKEVLEGFSLENLKYVGMLKKDNQTSGYVEANGHVYTVHVGNYIGQNFGHIQSIVPDKILLTEVVEDSYGNWTYRKTE
LPLSSGSEKNTATVQNNK
Nucleotide
Download Length: 537 bp
>NTDB_id=1122858 EL216_RS05880 WP_085389157.1 1269619..1270155(+) (pilP) [Neisseria animaloris strain NCTC12228]
ATGAAAAACAAAATATTACTCGCAGGCATATTGGCTCTAGCCGCCTGCACACCTGCCCATGAAGACTTGAAAACTTGGAC
GCAAGAAACCCAACAGCAAGCAAAAGCGAAGATAATTCCTTTTGAAGAACCAGTAATCAATCCACCGAAACCCTATACAC
CACCTGCTCATACCGGATTAAACGCTTTCGACAACAAACGCCTTAACAATGCTCAACAAGGCGCAAATGCACCCAATATG
GATCGGCCCAAAGAAGTACTTGAGGGTTTTAGCTTGGAAAATCTGAAATATGTTGGAATGTTAAAGAAAGATAACCAAAC
TTCCGGATATGTAGAAGCAAACGGTCATGTTTACACCGTTCATGTGGGTAACTATATTGGACAGAACTTTGGGCATATCC
AGTCAATAGTACCCGATAAGATTTTGCTGACAGAAGTTGTAGAAGATAGCTACGGCAACTGGACTTACCGAAAAACTGAA
TTACCATTGAGCAGCGGATCAGAAAAGAATACCGCAACAGTTCAAAACAATAAATAA
ATGAAAAACAAAATATTACTCGCAGGCATATTGGCTCTAGCCGCCTGCACACCTGCCCATGAAGACTTGAAAACTTGGAC
GCAAGAAACCCAACAGCAAGCAAAAGCGAAGATAATTCCTTTTGAAGAACCAGTAATCAATCCACCGAAACCCTATACAC
CACCTGCTCATACCGGATTAAACGCTTTCGACAACAAACGCCTTAACAATGCTCAACAAGGCGCAAATGCACCCAATATG
GATCGGCCCAAAGAAGTACTTGAGGGTTTTAGCTTGGAAAATCTGAAATATGTTGGAATGTTAAAGAAAGATAACCAAAC
TTCCGGATATGTAGAAGCAAACGGTCATGTTTACACCGTTCATGTGGGTAACTATATTGGACAGAACTTTGGGCATATCC
AGTCAATAGTACCCGATAAGATTTTGCTGACAGAAGTTGTAGAAGATAGCTACGGCAACTGGACTTACCGAAAAACTGAA
TTACCATTGAGCAGCGGATCAGAAAAGAATACCGCAACAGTTCAAAACAATAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Neisseria meningitidis MC58 |
53.216 |
96.067 |
0.511 |