Detailed information
Bioinformatically predicted
Overview
| Name | pilK | Type | Machinery gene |
| Locus tag | EL216_RS02900 | Genome accession | NZ_LR134440 |
| Coordinates | 601577..602137 (-) | Length | 186 a.a. |
| NCBI ID | WP_085390489.1 | Uniprot ID | - |
| Organism | Neisseria animaloris strain NCTC12228 | ||
| Function | type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 596577..607137
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL216_RS02880 (NCTC12228_00579) | - | 598673..599083 (+) | 411 | WP_085390497.1 | DoxX family protein | - |
| EL216_RS02885 (NCTC12228_00580) | ygiD | 599337..600134 (+) | 798 | WP_085390495.1 | 4,5-DOPA dioxygenase extradiol | - |
| EL216_RS02890 (NCTC12228_00581) | - | 600160..600843 (-) | 684 | WP_085390493.1 | Sir2 family NAD-dependent protein deacetylase | - |
| EL216_RS02895 (NCTC12228_00582) | - | 601094..601564 (-) | 471 | WP_085390491.1 | PilX family type IV pilin | - |
| EL216_RS02900 (NCTC12228_00583) | pilK | 601577..602137 (-) | 561 | WP_085390489.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| EL216_RS02905 (NCTC12228_00584) | - | 602116..603105 (-) | 990 | WP_085390487.1 | PilW family protein | - |
| EL216_RS02910 (NCTC12228_00585) | pilV | 603108..603833 (-) | 726 | WP_197720441.1 | type IV pilus modification protein PilV | - |
| EL216_RS02915 (NCTC12228_00586) | pilH | 603863..604552 (-) | 690 | WP_085390485.1 | GspH/FimT family pseudopilin | Machinery gene |
| EL216_RS02920 (NCTC12228_00587) | dnaB | 604712..606121 (-) | 1410 | WP_085390483.1 | replicative DNA helicase | - |
| EL216_RS02925 (NCTC12228_00588) | - | 606332..606913 (+) | 582 | WP_085390481.1 | superoxide dismutase | - |
Sequence
Protein
Download Length: 186 a.a. Molecular weight: 20293.12 Da Isoelectric Point: 9.6026
>NTDB_id=1122845 EL216_RS02900 WP_085390489.1 601577..602137(-) (pilK) [Neisseria animaloris strain NCTC12228]
MRKSYILRHNLKAAQQGFSLFIVLIVMLVIAFLVVSATQSYNTEQRISTNDADRKFALSLAEAALQVGEAEILNFKDSQV
VFSADCSNGLCAAAGSEVSTTPRRVVQAGGDTPAWKRKKECGGSLCIDTNGKIYNVGSSRGRRNARYIVEYVGTQPDGSP
IYRVTSKAWGKNNNTVVMLQSYVSVE
MRKSYILRHNLKAAQQGFSLFIVLIVMLVIAFLVVSATQSYNTEQRISTNDADRKFALSLAEAALQVGEAEILNFKDSQV
VFSADCSNGLCAAAGSEVSTTPRRVVQAGGDTPAWKRKKECGGSLCIDTNGKIYNVGSSRGRRNARYIVEYVGTQPDGSP
IYRVTSKAWGKNNNTVVMLQSYVSVE
Nucleotide
Download Length: 561 bp
>NTDB_id=1122845 EL216_RS02900 WP_085390489.1 601577..602137(-) (pilK) [Neisseria animaloris strain NCTC12228]
ATGCGCAAATCGTACATTTTAAGACATAATTTGAAAGCCGCACAGCAAGGATTTTCACTGTTTATTGTATTAATAGTAAT
GCTTGTTATTGCATTTTTGGTTGTGTCGGCTACCCAATCTTATAACACTGAGCAACGTATCAGTACTAATGATGCAGATA
GAAAATTTGCTTTATCTTTGGCTGAGGCGGCCTTACAAGTAGGGGAAGCAGAGATTTTAAATTTCAAAGATTCTCAGGTT
GTTTTTTCAGCCGATTGTAGTAATGGCTTATGTGCTGCTGCAGGTTCTGAAGTATCTACAACTCCACGGAGGGTTGTGCA
GGCAGGTGGTGATACTCCGGCATGGAAAAGAAAAAAGGAATGCGGAGGCTCTTTGTGTATTGATACGAATGGTAAGATTT
ATAATGTAGGTTCTTCAAGAGGTAGACGTAACGCCAGATATATCGTGGAATATGTTGGTACGCAGCCGGATGGCTCCCCT
ATTTACCGAGTTACTTCAAAGGCATGGGGCAAAAATAATAATACGGTTGTTATGTTGCAATCTTATGTATCTGTCGAGTA
A
ATGCGCAAATCGTACATTTTAAGACATAATTTGAAAGCCGCACAGCAAGGATTTTCACTGTTTATTGTATTAATAGTAAT
GCTTGTTATTGCATTTTTGGTTGTGTCGGCTACCCAATCTTATAACACTGAGCAACGTATCAGTACTAATGATGCAGATA
GAAAATTTGCTTTATCTTTGGCTGAGGCGGCCTTACAAGTAGGGGAAGCAGAGATTTTAAATTTCAAAGATTCTCAGGTT
GTTTTTTCAGCCGATTGTAGTAATGGCTTATGTGCTGCTGCAGGTTCTGAAGTATCTACAACTCCACGGAGGGTTGTGCA
GGCAGGTGGTGATACTCCGGCATGGAAAAGAAAAAAGGAATGCGGAGGCTCTTTGTGTATTGATACGAATGGTAAGATTT
ATAATGTAGGTTCTTCAAGAGGTAGACGTAACGCCAGATATATCGTGGAATATGTTGGTACGCAGCCGGATGGCTCCCCT
ATTTACCGAGTTACTTCAAAGGCATGGGGCAAAAATAATAATACGGTTGTTATGTTGCAATCTTATGTATCTGTCGAGTA
A
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilK | Neisseria gonorrhoeae MS11 |
50 |
100 |
0.5 |