Detailed information
Bioinformatically predicted
Overview
| Name | comO | Type | Machinery gene |
| Locus tag | EL190_RS00280 | Genome accession | NZ_LR134395 |
| Coordinates | 57867..58583 (-) | Length | 238 a.a. |
| NCBI ID | WP_032826301.1 | Uniprot ID | - |
| Organism | Haemophilus aegyptius strain NCTC8134 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 52867..63583
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL190_RS00260 (NCTC8134_00052) | nrdR | 52959..53408 (-) | 450 | WP_005648026.1 | transcriptional regulator NrdR | - |
| EL190_RS00265 (NCTC8134_00053) | recC | 53463..56843 (-) | 3381 | WP_006995602.1 | exodeoxyribonuclease V subunit gamma | - |
| EL190_RS00270 (NCTC8134_00054) | comQ | 56889..57176 (-) | 288 | WP_006995601.1 | DUF5374 domain-containing protein | Machinery gene |
| EL190_RS00275 (NCTC8134_00055) | comP | 57169..57852 (-) | 684 | WP_032826264.1 | DUF2572 family protein | Machinery gene |
| EL190_RS00280 (NCTC8134_00056) | comO | 57867..58583 (-) | 717 | WP_032826301.1 | type II secretion system protein J | Machinery gene |
| EL190_RS00285 (NCTC8134_00057) | comN | 58577..59095 (-) | 519 | WP_032826263.1 | type II secretion system protein | Machinery gene |
| EL190_RS00290 (NCTC8134_00058) | suhB | 59295..60098 (+) | 804 | WP_006995597.1 | inositol-1-monophosphatase | - |
| EL190_RS00295 (NCTC8134_00059) | nrfE | 60207..62114 (+) | 1908 | WP_006995596.1 | heme lyase NrfEFG subunit NrfE | - |
| EL190_RS00300 (NCTC8134_00060) | - | 62114..62644 (+) | 531 | WP_006995595.1 | DsbE family thiol:disulfide interchange protein | - |
Sequence
Protein
Download Length: 238 a.a. Molecular weight: 26745.09 Da Isoelectric Point: 9.5508
>NTDB_id=1122711 EL190_RS00280 WP_032826301.1 57867..58583(-) (comO) [Haemophilus aegyptius strain NCTC8134]
MMKTLLKGQTLLALMISLALSSLLLLSISHFYVQIQTQNQHMLLHLKLQAELQRTLQLIGKDLRRLGFRALNAKLTESNL
SLFELDEQGTAIFISQEDNAPPNSCVLFFYDLNKNGCIGKGSPKTCMKKGKNTSKSSTEELFGYKVSNKMIKTKLTYQSV
IPTNCTAETCKRAFQQTACNAGGGWADLLDNNEYEITRLQFNWLIEGKGLEIKLKGNLKQTPNISYETSLVVALWNQK
MMKTLLKGQTLLALMISLALSSLLLLSISHFYVQIQTQNQHMLLHLKLQAELQRTLQLIGKDLRRLGFRALNAKLTESNL
SLFELDEQGTAIFISQEDNAPPNSCVLFFYDLNKNGCIGKGSPKTCMKKGKNTSKSSTEELFGYKVSNKMIKTKLTYQSV
IPTNCTAETCKRAFQQTACNAGGGWADLLDNNEYEITRLQFNWLIEGKGLEIKLKGNLKQTPNISYETSLVVALWNQK
Nucleotide
Download Length: 717 bp
>NTDB_id=1122711 EL190_RS00280 WP_032826301.1 57867..58583(-) (comO) [Haemophilus aegyptius strain NCTC8134]
ATCATGAAAACATTATTAAAAGGGCAAACCCTATTAGCACTGATGATTTCGCTGGCTTTGTCGTCTTTATTATTGCTAAG
CATTTCGCATTTTTATGTGCAAATACAAACACAAAATCAACACATGTTATTGCATTTAAAACTACAAGCTGAATTACAAC
GAACATTACAGTTAATAGGTAAAGATCTTCGCCGATTAGGATTTCGAGCATTAAATGCAAAACTGACGGAAAGCAATTTA
TCTTTATTTGAATTAGATGAACAAGGCACAGCTATTTTTATTAGCCAAGAAGATAATGCGCCACCTAATAGCTGCGTGTT
GTTCTTTTATGATTTAAATAAAAATGGGTGTATTGGCAAAGGTTCGCCGAAAACCTGTATGAAAAAAGGTAAAAATACAT
CTAAAAGTAGTACTGAAGAATTATTCGGCTATAAAGTGAGTAACAAAATGATAAAAACCAAACTGACGTATCAAAGTGTT
ATTCCTACTAATTGCACGGCAGAAACTTGTAAACGTGCTTTTCAACAAACCGCTTGTAACGCTGGTGGTGGATGGGCAGA
TTTATTAGATAACAACGAATATGAAATCACTAGGTTACAATTTAATTGGTTAATTGAAGGCAAAGGATTAGAAATCAAGC
TAAAAGGAAATTTAAAACAAACCCCAAATATCAGTTATGAAACATCCCTTGTTGTTGCACTATGGAATCAAAAATAA
ATCATGAAAACATTATTAAAAGGGCAAACCCTATTAGCACTGATGATTTCGCTGGCTTTGTCGTCTTTATTATTGCTAAG
CATTTCGCATTTTTATGTGCAAATACAAACACAAAATCAACACATGTTATTGCATTTAAAACTACAAGCTGAATTACAAC
GAACATTACAGTTAATAGGTAAAGATCTTCGCCGATTAGGATTTCGAGCATTAAATGCAAAACTGACGGAAAGCAATTTA
TCTTTATTTGAATTAGATGAACAAGGCACAGCTATTTTTATTAGCCAAGAAGATAATGCGCCACCTAATAGCTGCGTGTT
GTTCTTTTATGATTTAAATAAAAATGGGTGTATTGGCAAAGGTTCGCCGAAAACCTGTATGAAAAAAGGTAAAAATACAT
CTAAAAGTAGTACTGAAGAATTATTCGGCTATAAAGTGAGTAACAAAATGATAAAAACCAAACTGACGTATCAAAGTGTT
ATTCCTACTAATTGCACGGCAGAAACTTGTAAACGTGCTTTTCAACAAACCGCTTGTAACGCTGGTGGTGGATGGGCAGA
TTTATTAGATAACAACGAATATGAAATCACTAGGTTACAATTTAATTGGTTAATTGAAGGCAAAGGATTAGAAATCAAGC
TAAAAGGAAATTTAAAACAAACCCCAAATATCAGTTATGAAACATCCCTTGTTGTTGCACTATGGAATCAAAAATAA
Domains
No domain identified.
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comO | Haemophilus influenzae Rd KW20 |
98.739 |
100 |
0.987 |