Detailed information    

insolico Bioinformatically predicted

Overview


Name   letS   Type   Regulator
Locus tag   EL201_RS09810 Genome accession   NZ_LR134380
Coordinates   2155866..2158598 (+) Length   910 a.a.
NCBI ID   WP_027222091.1    Uniprot ID   -
Organism   Legionella pneumophila subsp. pascullei strain NCTC12273     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2150866..2163598
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL201_RS09790 (NCTC12273_01966) gstA 2151011..2151616 (-) 606 WP_027222087.1 glutathione transferase GstA -
  EL201_RS09795 (NCTC12273_01967) - 2151811..2152806 (-) 996 WP_027222088.1 hypothetical protein -
  EL201_RS09800 (NCTC12273_01968) - 2152847..2154109 (-) 1263 WP_027222089.1 serine hydrolase domain-containing protein -
  EL201_RS09805 (NCTC12273_01969) gltX 2154355..2155767 (-) 1413 WP_027222090.1 glutamate--tRNA ligase -
  EL201_RS09810 (NCTC12273_01970) letS 2155866..2158598 (+) 2733 WP_027222091.1 two-component system sensor histidine kinase LetS Regulator
  EL201_RS09815 (NCTC12273_01971) - 2158696..2159940 (+) 1245 WP_027222092.1 6-phosphofructokinase -
  EL201_RS09820 (NCTC12273_01972) pilA2 2159937..2160350 (-) 414 WP_027222093.1 pilin Machinery gene
  EL201_RS09825 (NCTC12273_01973) pilA2 2160546..2160956 (-) 411 WP_011214168.1 pilin Machinery gene
  EL201_RS09830 (NCTC12273_01974) - 2161258..2161575 (+) 318 WP_027222094.1 BolA family protein -
  EL201_RS09835 (NCTC12273_01975) - 2161650..2163071 (+) 1422 WP_027222095.1 APC family permease -

Sequence


Protein


Download         Length: 910 a.a.        Molecular weight: 103088.56 Da        Isoelectric Point: 7.6532

>NTDB_id=1122507 EL201_RS09810 WP_027222091.1 2155866..2158598(+) (letS) [Legionella pneumophila subsp. pascullei strain NCTC12273]
MLKSIGIKYQLRITTLIPAFLVALLFAFFYNGLFGKDLKQHMSRLGEAYIRQLLPAAQYAMLRNDYRTLQGLINASTINP
EVKALAFYNADGRLIAYRGGKHSIHKPFNPPDYTGDYIESKQINPFTINFIAPITIPKFNLYSSTEFKEPSTPKVFQADD
ILGWLSIDIDTQSLLIKRYQMLIVTIFITLFGLLMGLTIHYFLSKRIYMPIARLRRSMKQILSNEFETEIRVSSPGELGI
IEKGCAHLQRQYLNTVRDLNHHIEIATADLQQSLELLEEKNIELSLEKKKTEEKSRQKSEFIANMSHEIRKPMNGVIGFT
NVLLESKLDPLQLDYVKTIKSSAQDLLSIINDILDFSKIDAGKLNLDCIPLDIRGCIDEVLSLASPNAHKKGIDLIPITD
INVPKMVLGDPLRIKQIISNLVTNAVKFTDHGYVLIRTKIEQETDKDYTLLFAITDTGIGISPEDQTKLFTAFNQADTSI
TRRYGGSGLGLVICKKLCEEMHGRISLTSEINKGSTFSARIKVEKLVAYEIEKNQTHRFAHLKIICFDDNPLHLEAMGNG
LGFWGIEAIRVDSFNKLSRTLTKHKDCKIAFINVNQGCERQAAELIAKHKQIPFVLISKWPINDFAALGARGFLYKPISI
QKLQDLIESIANENQTEKNTNQELDTLREQLRFLHPELLIAEDNPVNKMLLTSLLNNNANITTVDDGEMAFTACEDKKFD
MILLDLQMPKLNGLEAAKMIRQKSLMNKHSPIVLITASSSDLSSIDMKKSGVDYCFQKPIDEKQLLIQILRIVDKTKHAA
IDWQLCVQKVSGNQALAEEFLAKFIEELYKNREEFIELMHQKNVKGLADLAHKLHGACCFCGVPILQKRVAQLEKLARRT
ANADNLTEAFTDLIQSIDAVISEYENQYSQ

Nucleotide


Download         Length: 2733 bp        

>NTDB_id=1122507 EL201_RS09810 WP_027222091.1 2155866..2158598(+) (letS) [Legionella pneumophila subsp. pascullei strain NCTC12273]
ATGTTGAAAAGTATTGGTATTAAGTATCAGCTAAGAATCACTACTCTTATTCCTGCCTTTTTAGTTGCCTTGCTTTTTGC
CTTTTTTTATAACGGTCTATTTGGTAAAGATCTAAAGCAGCATATGTCCAGACTGGGTGAAGCCTACATTAGACAATTAC
TCCCAGCCGCCCAGTATGCCATGCTTCGCAATGATTATCGTACATTACAGGGTTTAATCAATGCCTCAACCATTAATCCA
GAGGTAAAGGCTTTGGCATTTTATAATGCCGATGGTCGATTAATTGCTTATCGTGGTGGCAAGCACTCTATTCATAAACC
CTTCAATCCGCCTGACTATACCGGTGACTACATTGAAAGTAAGCAAATTAATCCATTCACCATTAATTTTATAGCGCCGA
TTACTATCCCAAAGTTCAATTTGTACTCCAGTACAGAATTCAAAGAGCCTTCTACGCCTAAAGTATTTCAAGCCGACGAT
ATATTAGGCTGGCTATCTATTGACATTGATACACAATCACTCCTTATAAAACGCTATCAAATGCTTATTGTTACCATTTT
TATTACTCTCTTCGGTTTACTCATGGGTTTAACAATTCATTACTTCTTGTCTAAACGAATTTACATGCCTATTGCTCGAT
TGCGTAGAAGTATGAAACAAATTTTAAGTAATGAATTTGAAACAGAAATTCGTGTTTCAAGTCCAGGAGAATTAGGAATA
ATTGAAAAAGGTTGCGCTCATTTGCAACGACAATATTTAAATACGGTTCGCGATCTGAATCACCATATTGAAATCGCTAC
CGCAGATCTGCAACAAAGTCTCGAACTTCTGGAAGAAAAAAACATTGAGCTATCACTGGAGAAGAAAAAAACTGAAGAAA
AAAGCCGGCAAAAATCAGAATTTATTGCCAACATGAGTCATGAAATACGTAAACCAATGAATGGAGTGATTGGTTTTACC
AATGTTTTATTGGAAAGCAAGCTGGATCCTTTACAACTGGACTACGTTAAAACAATCAAATCATCAGCGCAGGATTTGTT
AAGTATCATCAATGATATTCTGGATTTTTCTAAAATTGATGCGGGCAAATTAAATCTCGATTGCATCCCGCTAGACATAA
GAGGCTGCATTGATGAGGTTTTATCCCTGGCAAGCCCCAATGCGCACAAAAAAGGAATAGATTTAATCCCGATTACAGAC
ATTAATGTGCCCAAAATGGTATTGGGTGACCCTTTAAGAATCAAGCAAATCATCAGTAATCTGGTGACCAATGCAGTAAA
ATTTACAGACCATGGATACGTTCTTATACGCACTAAAATAGAGCAAGAAACAGATAAAGATTATACCTTGCTATTTGCCA
TTACGGATACGGGAATAGGTATTTCACCAGAGGATCAAACGAAACTGTTTACTGCCTTCAATCAGGCAGATACCAGCATC
ACACGCCGTTACGGTGGATCAGGATTGGGCTTGGTGATATGTAAAAAATTATGTGAAGAAATGCATGGGCGCATTAGTCT
AACCAGTGAAATAAACAAAGGCTCTACTTTTAGCGCACGCATTAAAGTTGAAAAACTTGTTGCTTATGAGATTGAAAAAA
ATCAAACTCATCGTTTCGCCCATTTAAAAATCATTTGCTTTGATGACAATCCTCTCCATTTGGAAGCAATGGGTAATGGC
TTGGGCTTTTGGGGTATAGAAGCTATACGCGTTGATTCATTTAATAAACTTTCCCGAACATTGACAAAACATAAAGATTG
CAAAATTGCCTTTATTAATGTCAATCAAGGATGTGAGCGTCAAGCCGCTGAACTCATTGCCAAACATAAGCAAATTCCTT
TCGTATTAATTTCCAAATGGCCTATCAATGATTTTGCGGCGCTAGGTGCTCGAGGATTTCTTTACAAACCTATCAGCATC
CAAAAGCTTCAGGATTTGATTGAATCGATAGCTAATGAAAACCAAACTGAGAAAAATACTAACCAGGAACTGGATACTTT
ACGCGAACAACTTCGCTTTCTTCATCCAGAGCTACTGATTGCAGAAGACAACCCAGTCAATAAAATGCTATTAACATCCC
TATTAAACAATAATGCCAATATAACAACGGTTGATGATGGCGAAATGGCCTTTACTGCTTGTGAGGATAAAAAATTTGAC
ATGATTTTACTGGATCTGCAAATGCCAAAACTTAATGGTTTGGAAGCAGCCAAAATGATACGCCAAAAATCCCTAATGAA
TAAACACTCTCCTATCGTTCTCATTACCGCCAGTAGCAGTGATCTGAGCTCCATCGATATGAAAAAATCTGGAGTTGATT
ATTGTTTTCAAAAACCTATAGATGAAAAACAATTGTTAATCCAAATTCTTCGCATCGTTGATAAAACCAAACATGCTGCC
ATCGATTGGCAATTATGTGTTCAGAAAGTTTCAGGTAATCAAGCGCTTGCTGAAGAGTTCCTCGCCAAATTTATAGAAGA
ATTATATAAGAATCGTGAAGAATTTATTGAGTTAATGCATCAAAAAAACGTAAAGGGTCTGGCTGATTTGGCTCATAAAT
TACATGGCGCCTGTTGTTTTTGTGGTGTGCCTATTTTACAAAAGAGAGTAGCTCAATTAGAGAAACTTGCAAGACGAACA
GCTAATGCTGATAATTTAACCGAAGCCTTTACTGATTTAATACAAAGTATTGATGCAGTGATTAGTGAATATGAAAATCA
GTATTCGCAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letS Legionella pneumophila strain ERS1305867

98.791

100

0.988


Multiple sequence alignment