Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | EL167_RS04365 | Genome accession | NZ_LR134360 |
| Coordinates | 980334..980765 (+) | Length | 143 a.a. |
| NCBI ID | WP_047132356.1 | Uniprot ID | A0A143PDW9 |
| Organism | Staphylococcus condimenti strain NCTC13827 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 975334..985765
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL167_RS04330 (NCTC13827_00894) | atpD | 975373..976788 (+) | 1416 | WP_047132349.1 | F0F1 ATP synthase subunit beta | - |
| EL167_RS04335 (NCTC13827_00895) | - | 976809..977216 (+) | 408 | WP_047132350.1 | F0F1 ATP synthase subunit epsilon | - |
| EL167_RS04340 (NCTC13827_00896) | - | 977396..977629 (+) | 234 | WP_047132351.1 | DUF1146 family protein | - |
| EL167_RS04345 (NCTC13827_00897) | murA | 977740..979011 (+) | 1272 | WP_047132352.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| EL167_RS04350 | - | 979022..979210 (+) | 189 | WP_047132353.1 | DNA-directed RNA polymerase subunit beta | - |
| EL167_RS04355 (NCTC13827_00898) | fabZ | 979214..979651 (+) | 438 | WP_047132354.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| EL167_RS04360 (NCTC13827_00899) | - | 979702..980145 (-) | 444 | WP_047132355.1 | YwpF family protein | - |
| EL167_RS04365 (NCTC13827_00900) | ssb | 980334..980765 (+) | 432 | WP_047132356.1 | single-stranded DNA-binding protein | Machinery gene |
| EL167_RS04370 (NCTC13827_00901) | - | 981294..981929 (+) | 636 | WP_047132357.1 | transglycosylase family protein | - |
| EL167_RS04375 (NCTC13827_00902) | - | 982142..982816 (+) | 675 | WP_047132358.1 | transglycosylase family protein | - |
| EL167_RS04380 (NCTC13827_00903) | - | 983023..983712 (+) | 690 | WP_047132359.1 | transglycosylase family protein | - |
| EL167_RS04385 (NCTC13827_00905) | tenA | 983987..984673 (+) | 687 | WP_047132360.1 | thiaminase II | - |
| EL167_RS04390 (NCTC13827_00906) | thiD | 984670..985491 (+) | 822 | WP_047132361.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
Sequence
Protein
Download Length: 143 a.a. Molecular weight: 16040.98 Da Isoelectric Point: 7.2729
>NTDB_id=1122242 EL167_RS04365 WP_047132356.1 980334..980765(+) (ssb) [Staphylococcus condimenti strain NCTC13827]
MLNKIVIVGRLTRNPQLAEKEGSEIASFSVATERNYNYQGQTQQAVDYIFCKAYGKIAINIAKYTKKGSLVGITGHMRSY
KYEKDKQTHFMTELVVETIKFISNPNSNESSSSNQPTITDDFEGSPALQDHQLLSVTTDPQNQ
MLNKIVIVGRLTRNPQLAEKEGSEIASFSVATERNYNYQGQTQQAVDYIFCKAYGKIAINIAKYTKKGSLVGITGHMRSY
KYEKDKQTHFMTELVVETIKFISNPNSNESSSSNQPTITDDFEGSPALQDHQLLSVTTDPQNQ
Nucleotide
Download Length: 432 bp
>NTDB_id=1122242 EL167_RS04365 WP_047132356.1 980334..980765(+) (ssb) [Staphylococcus condimenti strain NCTC13827]
TTGTTAAATAAAATCGTAATTGTAGGACGATTAACTCGTAACCCTCAGTTAGCAGAAAAGGAGGGGAGTGAAATTGCCAG
TTTTAGTGTAGCCACAGAAAGAAATTATAATTATCAAGGTCAAACACAGCAAGCTGTTGATTATATTTTTTGTAAAGCGT
ATGGAAAGATAGCAATCAATATTGCTAAATACACTAAAAAAGGATCTCTTGTGGGTATTACGGGTCACATGCGTTCTTAT
AAGTATGAAAAAGATAAACAAACACATTTTATGACTGAATTAGTTGTTGAAACAATCAAATTTATTTCAAATCCAAACTC
TAATGAAAGTTCCTCTTCAAATCAACCTACTATAACTGATGACTTTGAAGGTAGCCCTGCCTTACAAGACCATCAGTTGC
TCTCAGTTACAACTGATCCTCAAAATCAGTAG
TTGTTAAATAAAATCGTAATTGTAGGACGATTAACTCGTAACCCTCAGTTAGCAGAAAAGGAGGGGAGTGAAATTGCCAG
TTTTAGTGTAGCCACAGAAAGAAATTATAATTATCAAGGTCAAACACAGCAAGCTGTTGATTATATTTTTTGTAAAGCGT
ATGGAAAGATAGCAATCAATATTGCTAAATACACTAAAAAAGGATCTCTTGTGGGTATTACGGGTCACATGCGTTCTTAT
AAGTATGAAAAAGATAAACAAACACATTTTATGACTGAATTAGTTGTTGAAACAATCAAATTTATTTCAAATCCAAACTC
TAATGAAAGTTCCTCTTCAAATCAACCTACTATAACTGATGACTTTGAAGGTAGCCCTGCCTTACAAGACCATCAGTTGC
TCTCAGTTACAACTGATCCTCAAAATCAGTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
54.412 |
95.105 |
0.517 |
| ssb | Staphylococcus aureus MW2 |
53.676 |
95.105 |
0.51 |