Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   EL140_RS05115 Genome accession   NZ_LR134336
Coordinates   1008022..1008831 (-) Length   269 a.a.
NCBI ID   WP_001290610.1    Uniprot ID   -
Organism   Streptococcus oralis ATCC 35037 strain NCTC 11427     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1003022..1013831
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL140_RS05110 (NCTC11427_01007) - 1006043..1007914 (-) 1872 WP_000150976.1 Eco57I restriction-modification methylase domain-containing protein -
  EL140_RS05115 (NCTC11427_01008) vicX 1008022..1008831 (-) 810 WP_001290610.1 MBL fold metallo-hydrolase Regulator
  EL140_RS05120 (NCTC11427_01009) micB 1008833..1010182 (-) 1350 WP_000568721.1 cell wall metabolism sensor histidine kinase VicK Regulator
  EL140_RS05125 (NCTC11427_01010) micA 1010175..1010882 (-) 708 WP_000722058.1 response regulator YycF Regulator
  EL140_RS05130 (NCTC11427_01011) mutY 1010939..1012117 (-) 1179 WP_000886126.1 A/G-specific adenine glycosylase -
  EL140_RS05135 (NCTC11427_01012) pta 1012200..1013174 (-) 975 WP_000451577.1 phosphate acetyltransferase -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 29951.93 Da        Isoelectric Point: 6.3426

>NTDB_id=1121848 EL140_RS05115 WP_001290610.1 1008022..1008831(-) (vicX) [Streptococcus oralis ATCC 35037 strain NCTC 11427]
MSEKGFKYSILASGSSGNSFYLETPKKKILVDAGLSGKKITSLLSEINRKPEDLDAILITHEHSDHIHGVGVLARKYGMD
LYANEKTWQAMENSKYLGKVDSSQKHIFEMGKTKTFGDIDIESFGVSHDAAAPQFYRFMKDDKSFVMLTDTGYVSDRMAG
IVENADGYLIESNHDVEILRAGSYAWRLKQRILSDLGHLSNEDGAEAMIRTMGNRTKKIYLGHLSKENNIKELAHMTMVN
QLAQADLGVGVDFKVYDTSPDTATPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=1121848 EL140_RS05115 WP_001290610.1 1008022..1008831(-) (vicX) [Streptococcus oralis ATCC 35037 strain NCTC 11427]
ATGAGTGAAAAAGGCTTTAAATACAGTATTTTAGCATCAGGTTCCAGTGGAAATTCCTTTTATCTGGAAACCCCAAAAAA
GAAAATCCTAGTAGATGCAGGCCTGTCTGGTAAGAAAATTACAAGTCTTTTGAGTGAAATCAATCGTAAACCTGAAGATT
TGGATGCGATTTTGATTACGCATGAGCATTCAGACCATATTCATGGAGTCGGTGTCTTGGCTCGCAAATATGGCATGGAC
CTTTACGCCAATGAAAAGACTTGGCAGGCTATGGAAAATAGCAAGTACCTCGGTAAGGTGGACTCTTCGCAGAAGCATAT
CTTTGAAATGGGCAAAACCAAAACCTTTGGCGATATCGACATTGAGAGTTTTGGGGTTAGCCATGATGCGGCAGCACCAC
AGTTTTACCGCTTTATGAAGGATGACAAGAGTTTTGTCATGTTGACCGATACAGGTTATGTAAGTGACCGTATGGCTGGA
ATAGTCGAAAATGCTGACGGTTACCTCATCGAGTCCAACCACGATGTAGAGATTTTGCGAGCAGGATCTTACGCTTGGCG
TCTCAAACAGCGAATTCTATCGGATCTCGGTCATCTTTCTAACGAAGACGGTGCTGAGGCCATGATTCGTACAATGGGAA
ATCGGACTAAGAAAATCTATCTTGGGCATTTATCCAAAGAGAACAATATCAAGGAGCTGGCTCATATGACTATGGTCAAC
CAGCTAGCCCAAGCGGATCTGGGAGTCGGAGTAGACTTTAAAGTTTATGATACCTCACCAGATACTGCAACACCATTAAC
AGATATATAA

Domains

Predicted by InterproScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-223)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.695

100

0.777

Multiple sequence alignment