Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   EL140_RS01275 Genome accession   NZ_LR134336
Coordinates   231142..232179 (+) Length   345 a.a.
NCBI ID   WP_000730772.1    Uniprot ID   A0A1X1GB13
Organism   Streptococcus oralis ATCC 35037 strain NCTC 11427     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 226142..237179
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL140_RS01240 (NCTC11427_00239) yidC 226177..227106 (-) 930 WP_002875438.1 membrane protein insertase YidC -
  EL140_RS01245 (NCTC11427_00240) - 227184..227462 (-) 279 WP_001174620.1 acylphosphatase -
  EL140_RS01250 (NCTC11427_00241) - 227496..228236 (+) 741 WP_000152688.1 TrmH family RNA methyltransferase -
  EL140_RS01255 (NCTC11427_00242) - 228291..228974 (+) 684 WP_001076937.1 Bax inhibitor-1/YccA family protein -
  EL140_RS01260 (NCTC11427_00243) asnA 229084..230076 (+) 993 WP_000747998.1 aspartate--ammonia ligase -
  EL140_RS01265 (NCTC11427_00244) rsmD 230141..230680 (+) 540 WP_002874201.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  EL140_RS01270 (NCTC11427_00245) coaD 230670..231158 (+) 489 WP_001280719.1 pantetheine-phosphate adenylyltransferase -
  EL140_RS01275 (NCTC11427_00246) sepM 231142..232179 (+) 1038 WP_000730772.1 SepM family pheromone-processing serine protease Regulator
  EL140_RS01280 - 232235..232465 (+) 231 WP_002874202.1 DUF1146 family protein -
  EL140_RS01285 (NCTC11427_00247) murA 232489..233772 (+) 1284 WP_000411908.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  EL140_RS01290 (NCTC11427_00248) - 233759..233953 (+) 195 WP_000739701.1 DNA-directed RNA polymerase subunit beta -
  EL140_RS01295 (NCTC11427_00249) endA 233994..234818 (+) 825 WP_000359002.1 DNA/RNA non-specific endonuclease Machinery gene
  EL140_RS01300 (NCTC11427_00250) - 234954..236285 (+) 1332 WP_000390016.1 hemolysin family protein -

Sequence


Protein


Download         Length: 345 a.a.        Molecular weight: 37539.74 Da        Isoelectric Point: 5.5304

>NTDB_id=1121823 EL140_RS01275 WP_000730772.1 231142..232179(+) (sepM) [Streptococcus oralis ATCC 35037 strain NCTC 11427]
MKKKTRWPLYVILALVLTFLAFVVPLPYYIEVPGGAEDIRRVLKVNETEDTEAGAYQFVTVGIRHATLSHLVYAWLTPFT
DIRSAKETTGGSTDAEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYLGVYVLTVTDNSTFKGILNIADTVTAVNDKTF
DSSKDLVDYVNSQQLGDTVKVTYEEDGKVKSAEGKIITLENGKNGIGIGLIDRTEVTSDVPIRFSTAGIGGPSAGLMFSL
AIYTQIADPGLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVAASRQGANIFFAPDNPVTEEAKKADPNAKSNYETALEAAK
TIKTEMKIVPVKTLQDAIDYLKNNP

Nucleotide


Download         Length: 1038 bp        

>NTDB_id=1121823 EL140_RS01275 WP_000730772.1 231142..232179(+) (sepM) [Streptococcus oralis ATCC 35037 strain NCTC 11427]
ATGAAGAAAAAAACTAGATGGCCCTTATATGTCATCCTAGCACTAGTATTGACTTTTTTAGCCTTTGTAGTACCTTTACC
TTACTACATAGAAGTTCCGGGTGGAGCGGAAGATATTCGTCGCGTTTTGAAAGTCAATGAAACAGAAGACACAGAAGCAG
GAGCTTACCAGTTTGTAACAGTCGGCATTCGACATGCAACCCTATCGCATCTTGTCTATGCTTGGTTAACACCTTTCACA
GATATTAGAAGTGCCAAGGAGACTACGGGTGGCTCTACTGATGCAGAATTTATGCGGATTAATCAGTTCTACATGCAAAC
TTCTCAAAACATGGCCAAGTATCAAGGATTGAAGACCGCTGGTAAGGATATTGAACTCAAGTATCTGGGAGTTTATGTCT
TGACCGTGACGGACAATTCAACTTTTAAGGGCATTCTGAACATAGCAGACACCGTGACGGCTGTTAATGACAAAACATTT
GACAGTTCAAAAGACTTGGTCGATTATGTTAATTCTCAACAATTAGGGGATACGGTCAAGGTAACCTATGAGGAAGACGG
AAAAGTCAAGTCTGCAGAAGGTAAAATTATCACTCTCGAAAACGGGAAAAACGGTATTGGGATTGGTTTGATTGACCGTA
CAGAAGTGACCAGTGACGTTCCAATTCGCTTTTCAACAGCTGGTATCGGCGGGCCAAGTGCCGGTCTCATGTTTAGCCTC
GCTATTTACACCCAGATAGCAGATCCAGGACTTCGTAATGGTCGCATCGTTGCGGGAACGGGAACTATTGATCGTGATGG
GAATGTTGGTGACATCGGTGGAATTGACAAAAAAGTGGTTGCAGCCTCTCGTCAGGGAGCCAACATCTTTTTTGCTCCTG
ACAATCCAGTCACCGAGGAAGCAAAAAAAGCAGATCCCAATGCGAAAAGTAACTATGAAACAGCCCTAGAAGCTGCTAAA
ACGATCAAAACGGAGATGAAAATCGTTCCGGTTAAGACCTTGCAGGATGCAATTGATTACCTTAAAAACAATCCCTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A1X1GB13

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

59.942

99.13

0.594


Multiple sequence alignment