Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   EL133_RS11260 Genome accession   NZ_LR134323
Coordinates   2142999..2143766 (+) Length   255 a.a.
NCBI ID   WP_006739949.1    Uniprot ID   G5KGD8
Organism   Streptococcus urinalis strain NCTC13766     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2137999..2148766
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL133_RS11250 (NCTC13766_02318) rlmH 2141015..2141494 (-) 480 WP_006739842.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL133_RS11255 (NCTC13766_02319) htrA 2141676..2142929 (+) 1254 WP_196792571.1 S1C family serine protease Regulator
  EL133_RS11260 (NCTC13766_02320) spo0J 2142999..2143766 (+) 768 WP_006739949.1 ParB/RepB/Spo0J family partition protein Regulator

Sequence


Protein


Download         Length: 255 a.a.        Molecular weight: 29041.60 Da        Isoelectric Point: 9.8768

>NTDB_id=1121557 EL133_RS11260 WP_006739949.1 2142999..2143766(+) (spo0J) [Streptococcus urinalis strain NCTC13766]
MTETLKTIAIKDIVPNPYQPRQIFNEKELLELSNSIKENGLIQPIIVRKSDVFGYELIAGERRLKASQLAGFSDIPAIIK
PISNQESMKQAIIENLQRENLNSIEEALAYQNLIEKNQMTHDELATYMGKSRPYITNIIRLLNLPKELRDSLEKGEISTG
HARALLAIEDRKQQAYWHHKIINDSLSVRSLEKALKPGNKKPKQTESIFVKSIEKEISQSLGISSKLICHQKGNGKLTLT
FSNMEELNRIINKLK

Nucleotide


Download         Length: 768 bp        

>NTDB_id=1121557 EL133_RS11260 WP_006739949.1 2142999..2143766(+) (spo0J) [Streptococcus urinalis strain NCTC13766]
ATGACTGAAACATTAAAAACAATTGCGATAAAAGATATCGTTCCAAATCCTTACCAGCCACGTCAAATCTTTAATGAAAA
AGAGCTTTTAGAATTATCAAATTCTATTAAAGAAAATGGACTTATTCAACCTATTATCGTCAGAAAATCTGATGTCTTTG
GTTATGAATTGATAGCTGGTGAAAGACGACTTAAAGCTTCTCAATTAGCTGGTTTTTCTGATATTCCCGCTATTATAAAG
CCTATTTCAAATCAAGAAAGTATGAAACAGGCTATTATTGAAAATTTACAACGAGAAAATCTCAACTCAATTGAAGAAGC
ACTTGCTTACCAAAATTTGATTGAAAAAAATCAAATGACTCATGATGAATTAGCAACTTATATGGGAAAATCAAGGCCGT
ACATTACTAATATAATCCGTCTTCTTAATTTACCAAAAGAACTTAGGGATAGTCTTGAAAAAGGTGAGATTAGTACAGGT
CACGCGCGTGCTCTTCTTGCTATTGAAGATCGTAAACAACAAGCTTATTGGCACCATAAAATTATCAATGATTCATTAAG
TGTTCGTTCTCTTGAAAAGGCATTAAAACCAGGTAATAAGAAACCAAAACAAACTGAATCCATCTTTGTCAAATCAATCG
AAAAAGAAATTTCTCAATCATTAGGTATTTCAAGTAAATTAATTTGTCATCAAAAAGGTAATGGTAAATTAACCTTAACA
TTTTCAAATATGGAAGAATTAAACAGAATTATCAACAAGTTAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G5KGD8

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

61.176

100

0.612


Multiple sequence alignment