Detailed information    

insolico Bioinformatically predicted

Overview


Name   spo0J   Type   Regulator
Locus tag   EL130_RS01985 Genome accession   NZ_LR134320
Coordinates   380393..381163 (-) Length   256 a.a.
NCBI ID   WP_002264637.1    Uniprot ID   -
Organism   Streptococcus mutans strain NCTC10832     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 375393..386163
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL130_RS01965 (NCTC10832_00370) ychF 375799..376914 (-) 1116 WP_002264633.1 redox-regulated ATPase YchF -
  EL130_RS01970 (NCTC10832_00371) - 377078..377269 (-) 192 WP_002262646.1 DUF951 domain-containing protein -
  EL130_RS01975 (NCTC10832_00372) dnaN 377542..378678 (-) 1137 WP_002262647.1 DNA polymerase III subunit beta -
  EL130_RS01980 (NCTC10832_00373) dnaA 378833..380191 (-) 1359 WP_002262648.1 chromosomal replication initiator protein DnaA -
  EL130_RS01985 (NCTC10832_00374) spo0J 380393..381163 (-) 771 WP_002264637.1 ParB/RepB/Spo0J family partition protein Regulator
  EL130_RS01990 (NCTC10832_00375) htrA 381639..382847 (-) 1209 WP_002262650.1 S1C family serine protease Regulator
  EL130_RS01995 (NCTC10832_00376) rlmH 383053..383532 (+) 480 WP_002269936.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  EL130_RS02000 (NCTC10832_00377) - 383877..384539 (+) 663 WP_002283821.1 YoaK family protein -

Sequence


Protein


Download         Length: 256 a.a.        Molecular weight: 29506.19 Da        Isoelectric Point: 10.1578

>NTDB_id=1121404 EL130_RS01985 WP_002264637.1 380393..381163(-) (spo0J) [Streptococcus mutans strain NCTC10832]
MTEQLKYLNTKDINPNPYQPRLQFKTKELEELAQSIKENGLIQPIIVRKSDIFGYDLVAGERRLKAAKLAGLNKIPVIIK
KISDDDSMKQAIIENLQRSDLNPIEEAKAYQNLINRNHMTHDDIAKVIGKSRPYITNSIRLLNLPLHISQALEKGLISQG
HARLLLSIEKQDLQDKWFQKILTEQLSVHQIERALKSQTKKEKKPSKDIFLAEKEKELSQSLGLPVVIHYNKKHQGQLKI
SFSSEEDFNRLMNKLN

Nucleotide


Download         Length: 771 bp        

>NTDB_id=1121404 EL130_RS01985 WP_002264637.1 380393..381163(-) (spo0J) [Streptococcus mutans strain NCTC10832]
ATGACTGAACAATTAAAATATCTTAATACTAAAGATATTAATCCAAATCCCTATCAACCTCGACTGCAATTTAAAACTAA
AGAATTGGAAGAGTTAGCACAATCTATTAAAGAAAATGGCTTAATTCAACCCATTATTGTTCGAAAATCTGATATTTTTG
GCTACGATTTGGTTGCAGGAGAAAGGCGCTTAAAAGCAGCAAAATTAGCTGGATTAAATAAGATTCCTGTTATTATCAAA
AAAATTTCTGATGATGACAGTATGAAGCAAGCTATTATCGAAAATTTACAACGTTCTGATCTTAATCCTATTGAAGAAGC
CAAAGCTTACCAAAATCTCATTAATAGAAATCATATGACTCATGATGATATTGCTAAAGTAATTGGAAAATCAAGACCAT
ATATTACTAACAGTATCAGATTGTTAAATCTTCCTCTGCACATCAGCCAAGCTCTTGAAAAAGGTCTAATTTCTCAAGGA
CACGCACGACTTCTTTTAAGTATAGAAAAGCAAGACTTACAAGATAAATGGTTCCAAAAAATTCTTACTGAACAGTTAAG
TGTGCATCAAATTGAAAGAGCACTTAAAAGTCAAACAAAGAAAGAAAAAAAACCTTCAAAAGACATTTTTCTGGCAGAAA
AAGAAAAAGAGCTAAGTCAATCATTAGGCTTACCTGTTGTTATTCATTATAATAAAAAACATCAAGGTCAACTTAAAATT
TCTTTTTCGTCCGAAGAAGACTTCAACAGATTAATGAACAAGTTAAACTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

99.609

100

0.996


Multiple sequence alignment