Detailed information
Bioinformatically predicted
Overview
| Name | pilV | Type | Machinery gene |
| Locus tag | EL233_RS16275 | Genome accession | NZ_LR134319 |
| Coordinates | 3486541..3487098 (+) | Length | 185 a.a. |
| NCBI ID | WP_126526840.1 | Uniprot ID | - |
| Organism | Stutzerimonas stutzeri strain NCTC10450 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3481541..3492098
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EL233_RS16250 (NCTC10450_03276) | speA | 3481572..3483485 (-) | 1914 | WP_049325314.1 | arginine decarboxylase | - |
| EL233_RS16255 (NCTC10450_03277) | - | 3483608..3483979 (-) | 372 | WP_013981879.1 | translation initiation factor Sui1 | - |
| EL233_RS16260 (NCTC10450_03278) | thiO | 3484128..3485225 (-) | 1098 | WP_061374037.1 | glycine oxidase ThiO | - |
| EL233_RS16265 (NCTC10450_03279) | - | 3485379..3485873 (+) | 495 | WP_041771646.1 | GspH/FimT family pseudopilin | - |
| EL233_RS16270 (NCTC10450_03280) | - | 3486041..3486532 (+) | 492 | WP_013981877.1 | GspH/FimT family pseudopilin | - |
| EL233_RS16275 (NCTC10450_03281) | pilV | 3486541..3487098 (+) | 558 | WP_126526840.1 | type IV pilus modification protein PilV | Machinery gene |
| EL233_RS16280 (NCTC10450_03282) | - | 3487095..3487946 (+) | 852 | WP_045159203.1 | PilW family protein | - |
| EL233_RS16285 (NCTC10450_03283) | - | 3487943..3488548 (+) | 606 | WP_013981874.1 | PilX N-terminal domain-containing pilus assembly protein | - |
Sequence
Protein
Download Length: 185 a.a. Molecular weight: 20185.02 Da Isoelectric Point: 4.8297
>NTDB_id=1121365 EL233_RS16275 WP_126526840.1 3486541..3487098(+) (pilV) [Stutzerimonas stutzeri strain NCTC10450]
MKTNKGFSLIEVLVALLLTTIGVLGMVALQGRSIQYTQDSVQRNTAILLSGDLIEIIRAHPKELFKTSPPKFPMNSGLKG
SSLFYKEAGSDFIDRESCVASQTRIAQTAKELRDCWADKVEALLPGGAELFDSDTYICRSSAPGNCDGQGSMLEIHMAWQ
VREGACLDSSNTDDTVCTYTVRVEP
MKTNKGFSLIEVLVALLLTTIGVLGMVALQGRSIQYTQDSVQRNTAILLSGDLIEIIRAHPKELFKTSPPKFPMNSGLKG
SSLFYKEAGSDFIDRESCVASQTRIAQTAKELRDCWADKVEALLPGGAELFDSDTYICRSSAPGNCDGQGSMLEIHMAWQ
VREGACLDSSNTDDTVCTYTVRVEP
Nucleotide
Download Length: 558 bp
>NTDB_id=1121365 EL233_RS16275 WP_126526840.1 3486541..3487098(+) (pilV) [Stutzerimonas stutzeri strain NCTC10450]
ATGAAAACCAATAAAGGCTTCAGCCTGATCGAAGTGCTCGTAGCGCTACTGCTGACCACCATCGGAGTACTTGGAATGGT
GGCGCTGCAAGGCCGCAGCATCCAATACACCCAGGACTCCGTACAACGCAACACGGCCATTCTTCTGTCCGGAGACCTTA
TCGAAATCATACGAGCACACCCGAAAGAGCTCTTCAAAACCTCTCCTCCAAAGTTCCCCATGAACAGCGGATTAAAAGGC
AGCTCCCTGTTCTACAAGGAGGCCGGAAGCGATTTCATTGATCGTGAAAGCTGCGTCGCTAGCCAGACACGAATAGCGCA
GACAGCAAAAGAGCTGCGTGACTGCTGGGCGGACAAAGTGGAAGCGCTGCTACCTGGCGGAGCCGAGCTGTTCGACAGCG
ATACCTACATCTGCCGAAGTTCCGCGCCGGGCAATTGCGACGGCCAAGGCTCGATGCTCGAGATTCATATGGCCTGGCAA
GTTCGAGAAGGCGCCTGTCTCGACTCGAGCAATACCGACGACACCGTCTGCACCTACACCGTTCGGGTAGAACCATGA
ATGAAAACCAATAAAGGCTTCAGCCTGATCGAAGTGCTCGTAGCGCTACTGCTGACCACCATCGGAGTACTTGGAATGGT
GGCGCTGCAAGGCCGCAGCATCCAATACACCCAGGACTCCGTACAACGCAACACGGCCATTCTTCTGTCCGGAGACCTTA
TCGAAATCATACGAGCACACCCGAAAGAGCTCTTCAAAACCTCTCCTCCAAAGTTCCCCATGAACAGCGGATTAAAAGGC
AGCTCCCTGTTCTACAAGGAGGCCGGAAGCGATTTCATTGATCGTGAAAGCTGCGTCGCTAGCCAGACACGAATAGCGCA
GACAGCAAAAGAGCTGCGTGACTGCTGGGCGGACAAAGTGGAAGCGCTGCTACCTGGCGGAGCCGAGCTGTTCGACAGCG
ATACCTACATCTGCCGAAGTTCCGCGCCGGGCAATTGCGACGGCCAAGGCTCGATGCTCGAGATTCATATGGCCTGGCAA
GTTCGAGAAGGCGCCTGTCTCGACTCGAGCAATACCGACGACACCGTCTGCACCTACACCGTTCGGGTAGAACCATGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilV | Pseudomonas aeruginosa PAK |
48.901 |
98.378 |
0.481 |