Detailed information NTG1121351

Bioinformatically predicted

Overview

• Name: comA
• Type: Machinery gene
• Locus tag: EL233_RS07950
• Genome accession: NZ_LR134319
• Coordinates: 1716952..1719177 (+)
• Length: 741 a.a.
• NCBI ID: WP_126526366.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain NCTC10450
• Function: ssDNA transport through the inner membrane (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1711952..1724177

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL233_RS07920 (NCTC10450_01596)	-	1712101..1712409 (-)	309	WP_011913753.1	hypothetical protein	-
EL233_RS07925 (NCTC10450_01597)	-	1712413..1713048 (-)	636	WP_013983265.1	PilZ domain-containing protein	-
EL233_RS07930 (NCTC10450_01598)	-	1713081..1714328 (+)	1248	WP_041771782.1	lipoprotein-releasing ABC transporter permease subunit	-
EL233_RS07935 (NCTC10450_01599)	lolD	1714336..1715034 (+)	699	WP_013983263.1	lipoprotein-releasing ABC transporter ATP-binding protein LolD	-
EL233_RS07940 (NCTC10450_01600)	-	1715034..1716278 (+)	1245	WP_026012454.1	lipoprotein-releasing ABC transporter permease subunit	-
EL233_RS07945 (NCTC10450_01601)	-	1716291..1716806 (-)	516	WP_011913748.1	DUF2062 domain-containing protein	-
EL233_RS07950 (NCTC10450_01602)	comA	1716952..1719177 (+)	2226	WP_126526366.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
EL233_RS07955 (NCTC10450_01603)	-	1719249..1719881 (+)	633	WP_013983260.1	MotA/TolQ/ExbB proton channel family protein	-
EL233_RS07960 (NCTC10450_01604)	-	1719878..1720306 (+)	429	WP_013983259.1	ExbD/TolR family protein	-
EL233_RS07965 (NCTC10450_01605)	lpxK	1720306..1721310 (+)	1005	WP_126526367.1	tetraacyldisaccharide 4'-kinase	-
EL233_RS07970 (NCTC10450_01606)	-	1721356..1721541 (+)	186	WP_011913743.1	Trm112 family protein	-
EL233_RS07975 (NCTC10450_01607)	kdsB	1721538..1722302 (+)	765	WP_125866165.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
EL233_RS07980 (NCTC10450_01608)	-	1722304..1722771 (+)	468	WP_126526368.1	low molecular weight protein-tyrosine-phosphatase	-
EL233_RS07985 (NCTC10450_01609)	murB	1722768..1723787 (+)	1020	WP_125882006.1	UDP-N-acetylmuramate dehydrogenase	-

Sequence

Protein

• Length: 741 a.a.
• Molecular weight: 81131.72 Da
• Isoelectric Point: 10.0442

>NTDB_id=1121351 EL233_RS07950 WP_126526366.1 1716952..1719177(+) (comA) [Stutzerimonas stutzeri strain NCTC10450]
MRTWMLALAAGLVLPRFLPALPAQWFCAALAAVGLLLLLRHRWVAPGFFLLGLSWACYQSQSAIDDRLPASMDGRTFWIE
GRVVGLPSRIGNVVRFELDDIQSRHAGLPSKVRLSWYDGPLLQAGERWRLAARLKRPHGMVNPHAFDYEAWLLARRIGAT
GTIKAGERLTASAASDGWRDQLRARLMAVPASDRQGAIAALVVGDDSGLSRGDWQVLQDTGTVHLMVISGQHIGMLAGLL
YGLVALLARLGAWPRRLPWLPWACGLALSGALAYGWLAGFDVPVRRACLMVTVVLVWRLRFRHLGVWLPLLLALDGVLLF
DPLVTLQPGFWLSFGAVAVLALAFSGRLGSWRWWMALTRAQWAATLGLLPLLLALGLPVSASGPLANLLAVPWVSLTVPF
ALLGTLLLPLAGVGEALLSVVGYSLALLFDVLAAIANWQPAWIAVGLPVWALALIGLGVLLLLLPAGIPLRSLGLLLLLP
LVFPPRVEVPDGRAQVWVLDVGQGLAVLVRTREYALLYDAGPKQGDFDTGERVVVPSLRTLGVTRLDLLLLSHADNDHSG
GADAVQRLLRVDRVVSGEPSRLAPDLGAEHCESGRSWQWNNVRFSLWQWQMARDSNQQSCVLQIEANGERILLTGDIDQA
AERAWLASEQRTPSHWLLLPHHGSRSSSSEPFLRGVASHAALISRSLHNAFGHPHPSVIERLETLDIQAYDTALHGAIRI
ELGSFSPPRLQRSQRRFWREK

Nucleotide

• Length: 2226 bp

>NTDB_id=1121351 EL233_RS07950 WP_126526366.1 1716952..1719177(+) (comA) [Stutzerimonas stutzeri strain NCTC10450]
ATGCGCACATGGATGCTTGCGCTCGCCGCGGGTCTGGTCCTGCCACGCTTCCTTCCTGCCTTGCCCGCGCAGTGGTTCTG
TGCGGCGCTGGCGGCTGTCGGACTGCTGCTCCTGCTGCGTCACCGCTGGGTGGCGCCGGGCTTTTTTCTGCTGGGTTTGA
GCTGGGCCTGCTACCAGAGCCAGAGCGCCATCGACGACCGCTTACCGGCGTCCATGGACGGTCGTACGTTTTGGATCGAG
GGACGGGTAGTGGGGTTGCCCAGCCGTATCGGCAATGTGGTGCGCTTCGAGCTCGACGACATCCAATCGCGCCATGCCGG
GTTGCCATCGAAGGTGCGGCTGTCCTGGTATGACGGTCCGCTGCTGCAAGCCGGCGAGCGCTGGCGCCTGGCGGCGCGAC
TGAAGCGACCGCATGGCATGGTCAATCCCCACGCCTTCGATTACGAAGCCTGGTTGCTGGCGCGACGCATCGGCGCCACG
GGCACGATAAAGGCGGGCGAGCGCCTGACGGCGTCGGCGGCAAGCGACGGATGGCGCGATCAGCTTCGGGCGCGGCTCAT
GGCCGTTCCGGCATCCGATCGGCAGGGCGCCATCGCGGCACTGGTGGTGGGTGACGATTCCGGTTTGAGCCGCGGCGACT
GGCAGGTTTTGCAGGACACCGGCACCGTCCACCTGATGGTCATCTCCGGACAGCACATCGGCATGCTGGCGGGGCTGCTC
TATGGTCTGGTCGCATTGCTGGCTCGCCTGGGTGCGTGGCCGCGGCGGTTGCCCTGGTTGCCCTGGGCGTGCGGGCTGGC
GTTAAGCGGTGCGCTGGCCTATGGCTGGCTGGCCGGTTTCGATGTACCGGTGCGTCGTGCCTGCCTGATGGTGACGGTGG
TGCTTGTCTGGCGATTGCGCTTTCGCCATCTGGGTGTCTGGTTGCCGCTGCTGCTGGCGCTCGATGGTGTCCTGCTGTTC
GATCCCCTGGTCACATTGCAGCCGGGGTTCTGGCTGTCGTTTGGAGCGGTGGCGGTTCTGGCATTGGCGTTCTCGGGGCG
GCTCGGCTCATGGCGCTGGTGGATGGCCCTGACCCGGGCGCAGTGGGCGGCCACCCTTGGTCTGCTTCCGCTGTTGCTGG
CCCTCGGATTGCCGGTAAGTGCGAGCGGGCCGCTGGCCAATCTGCTTGCCGTACCCTGGGTGAGTCTGACCGTGCCCTTT
GCGTTGCTCGGTACGCTCCTGCTGCCCCTGGCCGGGGTTGGCGAAGCGCTGCTGTCGGTGGTCGGCTATTCGCTGGCATT
GCTGTTCGACGTCCTGGCGGCGATAGCCAATTGGCAACCTGCCTGGATTGCGGTCGGCCTGCCCGTCTGGGCGCTGGCGT
TAATCGGGCTGGGCGTCCTGTTGCTGTTGCTGCCCGCGGGTATTCCGCTGCGTTCGCTGGGTTTGCTGCTGCTATTGCCG
CTGGTATTCCCGCCTCGTGTGGAGGTGCCAGACGGCCGGGCGCAGGTCTGGGTATTGGATGTCGGGCAGGGCCTGGCGGT
GCTTGTACGCACTCGCGAGTATGCACTGCTCTACGATGCCGGGCCGAAGCAGGGCGACTTCGATACGGGCGAGCGGGTGG
TCGTCCCTTCGCTCCGGACCCTTGGCGTGACTCGGTTGGACCTGCTGTTGCTGAGTCATGCCGATAATGATCATTCGGGC
GGTGCGGACGCGGTTCAGCGGTTGCTGAGGGTTGATCGGGTGGTCAGTGGCGAGCCGTCGCGCCTTGCGCCTGATCTGGG
CGCCGAACATTGCGAAAGCGGTCGCAGCTGGCAGTGGAACAATGTGCGCTTCAGTCTGTGGCAATGGCAGATGGCACGCG
ACAGCAATCAGCAGTCCTGCGTGCTGCAAATCGAGGCCAATGGTGAGCGGATCCTGCTCACCGGCGACATCGACCAGGCC
GCGGAGCGGGCATGGCTGGCAAGCGAACAGCGCACCCCATCGCACTGGCTGTTGCTGCCCCACCATGGCAGCCGCAGCTC
GTCGTCAGAACCGTTTCTGCGCGGTGTCGCCTCCCATGCCGCGCTGATCTCGCGCAGCCTGCACAATGCCTTCGGCCACC
CACACCCAAGCGTGATCGAGCGGCTCGAGACCCTCGATATCCAGGCCTACGACACCGCCTTGCATGGCGCAATCCGCATA
GAGCTGGGAAGCTTTTCGCCTCCTCGGCTACAACGTTCGCAGCGACGATTCTGGCGGGAAAAATGA

Domains

Predicted by InterproScan.

• Domain of unknown function (DUF4131) (DUF4131) (23-168)

• Metallo-beta-lactamase superfamily (Lactamase_B) (500-674)

• Competence protein (Competence) (201-464)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comA	Pseudomonas stutzeri DSM 10701	67.227	96.356	0.648
comA	Ralstonia pseudosolanacearum GMI1000	36.761	100	0.386