Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   EL233_RS01340 Genome accession   NZ_LR134319
Coordinates   300049..300456 (+) Length   135 a.a.
NCBI ID   WP_003282729.1    Uniprot ID   -
Organism   Stutzerimonas stutzeri strain NCTC10450     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 295049..305456
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL233_RS01310 (NCTC10450_00262) - 295219..296235 (-) 1017 WP_011914964.1 aspartate carbamoyltransferase catalytic subunit -
  EL233_RS01315 (NCTC10450_00263) pyrR 296288..296803 (-) 516 WP_014597998.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  EL233_RS01320 (NCTC10450_00264) ruvX 296821..297249 (-) 429 WP_011914962.1 Holliday junction resolvase RuvX -
  EL233_RS01325 (NCTC10450_00265) - 297246..297815 (-) 570 WP_011914961.1 YqgE/AlgH family protein -
  EL233_RS01330 (NCTC10450_00266) - 297881..298774 (-) 894 WP_126525742.1 energy transducer TonB -
  EL233_RS01335 (NCTC10450_00267) gshB 298862..299812 (-) 951 WP_013984318.1 glutathione synthase -
  EL233_RS01340 (NCTC10450_00268) pilG 300049..300456 (+) 408 WP_003282729.1 twitching motility response regulator PilG Regulator
  EL233_RS01345 (NCTC10450_00269) pilH 300501..300866 (+) 366 WP_003297216.1 twitching motility response regulator PilH -
  EL233_RS01350 (NCTC10450_00270) - 300908..301444 (+) 537 WP_013984316.1 chemotaxis protein CheW -
  EL233_RS01355 (NCTC10450_00271) - 301523..303571 (+) 2049 WP_011914956.1 methyl-accepting chemotaxis protein -
  EL233_RS01360 (NCTC10450_00272) - 303632..304498 (+) 867 WP_061373090.1 CheR family methyltransferase -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14826.22 Da        Isoelectric Point: 7.2439

>NTDB_id=1121345 EL233_RS01340 WP_003282729.1 300049..300456(+) (pilG) [Stutzerimonas stutzeri strain NCTC10450]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPRIIFVDIMMPRLDGYQTCALIKNNSSFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFAPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=1121345 EL233_RS01340 WP_003282729.1 300049..300456(+) (pilG) [Stutzerimonas stutzeri strain NCTC10450]
ATGGAACAGCACTCCGAGGGCTTGAAGGTCATGGTGATCGACGATTCGAAAACGATTCGTCGCACTGCTGAAACCCTGCT
GAAGAAAGTAGGTTGCGATGTCATCACCGCAGTGGACGGTTTCGATGCCCTCGCCAAGATTGCGGATACTCATCCCCGCA
TCATCTTTGTCGATATTATGATGCCCAGGCTGGACGGTTATCAGACCTGCGCGTTGATCAAGAACAACAGTTCCTTCAAG
TCGACGCCAGTGATCATGCTGTCTTCTAAAGACGGCCTGTTCGACAAGGCGAAGGGGCGCATTGTCGGCTCCGATCAATA
CCTCACCAAACCGTTCAGCAAAGAAGAGCTGCTCGGTGCAATCAAGGCTCATGTCCCTGATTTCGCGCCGGTGGAGCAAG
CGTCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704
  vicR Streptococcus mutans UA159

42.857

93.333

0.4

Multiple sequence alignment