Detailed information NTG1121342

Bioinformatically predicted

Overview

• Name: pilA
• Type: Machinery gene
• Locus tag: EL233_RS01145
• Genome accession: NZ_LR134319
• Coordinates: 261319..262587 (+)
• Length: 422 a.a.
• NCBI ID: WP_125876273.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain NCTC10450
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 256319..267587

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
EL233_RS01125 (NCTC10450_00225)	-	257187..257591 (+)	405	WP_126525714.1	ribonucleotide reductase subunit alpha	-
EL233_RS01130 (NCTC10450_00226)	rsmD	257603..258205 (-)	603	WP_045632982.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
EL233_RS01135 (NCTC10450_00227)	-	258205..259746 (-)	1542	WP_079328522.1	M16 family metallopeptidase	-
EL233_RS01140 (NCTC10450_00228)	-	259739..261091 (-)	1353	WP_126525716.1	M16 family metallopeptidase	-
EL233_RS01145 (NCTC10450_00229)	pilA	261319..262587 (+)	1269	WP_125876273.1	signal recognition particle-docking protein FtsY	Machinery gene
EL233_RS01150 (NCTC10450_00230)	ftsE	262584..263252 (+)	669	WP_011914996.1	cell division ATP-binding protein FtsE	-
EL233_RS01155 (NCTC10450_00231)	ftsX	263252..264271 (+)	1020	WP_125865046.1	permease-like cell division protein FtsX	-
EL233_RS01160 (NCTC10450_00232)	rpoH	264382..265236 (+)	855	WP_011914994.1	RNA polymerase sigma factor RpoH	-

Sequence

Protein

• Length: 422 a.a.
• Molecular weight: 44980.11 Da
• Isoelectric Point: 4.6538

>NTDB_id=1121342 EL233_RS01145 WP_125876273.1 261319..262587(+) (pilA) [Stutzerimonas stutzeri strain NCTC10450]
MFGSNDDKKTPAEPGEKKGLFGWLRKKPQPASAEQPATEPQADSEPVEQTVANVETPAATPQHEEPRAVEADLQPTEVIE
SPPPDPEPEPEPEPEPEPVSAPVVAATSEAPAKLGFFARLRQGLSKTSASIGEGMASLFLGKKAIDDDLLDELETRLLTA
DVGVEATTAIMQNLTRRVSRKELADSGALYTALQEELVGLLKPVEQPLAIDAGKRPYVILVVGVNGVGKTTTIGKLAKKL
QLDGKKVMLAAGDTFRAAAVEQLQVWGERNGIPVIAQHTGADSASVIFDAVQAAKARGIDVLIADTAGRLHTKDNLMEEL
KKVRRVMGKLDESAPHEVLLVLDAGTGQNAINQTRQFNQAVELTGLALTKLDGTAKGGVIFALAKQFGTPIRYIGVGEGI
DDLRTFEADAFVKALFAQREDA

Nucleotide

• Length: 1269 bp

>NTDB_id=1121342 EL233_RS01145 WP_125876273.1 261319..262587(+) (pilA) [Stutzerimonas stutzeri strain NCTC10450]
ATGTTTGGTTCCAACGACGACAAGAAGACGCCGGCCGAGCCCGGCGAGAAGAAAGGCCTGTTCGGCTGGCTGCGCAAGAA
GCCCCAGCCCGCTTCGGCAGAGCAGCCGGCCACCGAGCCTCAAGCGGACAGCGAACCGGTCGAGCAGACCGTGGCGAATG
TCGAAACGCCTGCCGCCACGCCGCAGCACGAGGAGCCTCGCGCCGTCGAGGCCGATCTGCAGCCGACCGAGGTGATCGAG
TCGCCGCCGCCAGACCCTGAACCCGAACCAGAGCCAGAGCCAGAGCCAGAGCCGGTATCTGCCCCGGTCGTTGCGGCCAC
GTCGGAAGCGCCGGCCAAGCTCGGCTTCTTCGCTCGCCTGCGCCAGGGTCTGTCGAAGACCAGCGCCAGCATCGGCGAAG
GCATGGCCAGCCTGTTCCTCGGCAAGAAGGCCATCGACGACGATCTGCTCGATGAACTGGAAACCCGCCTGCTGACCGCC
GACGTCGGCGTCGAGGCGACCACCGCGATCATGCAGAACCTCACCCGGCGCGTCTCGCGCAAGGAGCTGGCCGACAGCGG
CGCGCTCTACACCGCGCTGCAGGAGGAGCTCGTCGGCCTGCTCAAGCCGGTCGAGCAGCCGCTGGCGATCGATGCCGGCA
AGCGTCCCTACGTGATCCTGGTGGTCGGCGTGAACGGCGTCGGCAAGACCACCACCATCGGCAAGCTGGCCAAGAAACTG
CAACTCGACGGCAAGAAGGTCATGCTCGCCGCCGGTGACACCTTCCGCGCCGCAGCGGTTGAGCAGCTGCAGGTGTGGGG
CGAGCGCAACGGCATCCCGGTGATCGCCCAGCACACCGGCGCGGATTCCGCCTCGGTGATCTTCGATGCCGTGCAGGCCG
CCAAGGCACGCGGCATCGACGTGCTGATCGCCGACACCGCCGGCCGCCTGCACACCAAGGACAACCTGATGGAAGAGCTG
AAGAAGGTCCGCCGGGTGATGGGCAAGCTCGACGAGTCGGCGCCACATGAGGTGCTGCTGGTGCTCGATGCCGGTACCGG
ACAGAACGCCATCAACCAGACCCGCCAGTTCAACCAGGCGGTCGAGCTGACCGGGCTTGCGCTGACCAAGCTCGACGGCA
CCGCCAAGGGCGGCGTGATCTTCGCCCTGGCCAAGCAGTTCGGCACGCCGATCCGCTACATCGGCGTAGGCGAAGGTATC
GACGATCTGCGCACCTTCGAGGCCGATGCCTTCGTCAAGGCGCTGTTCGCCCAGCGGGAAGACGCATGA

Domains

Predicted by InterproScan.

• SRP54-type protein, GTPase domain (SRP54) (217-416)

• SRP54-type protein, helical bundle domain (SRP54_N) (132-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilA	Neisseria gonorrhoeae MS11	50.478	99.052	0.5